Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01702 ATGGCGACGAACAAGATCGAACGCGGTCACCAGATGTACCGTGACGGACGTTACGGCGAGGCGTTAGGGTTTTACACGGAGGCGATCACCATGGCAAAGACCAATCAGCAGAAGATCGCTTTGCATAGTAATCGAGCTGCTTGTTTCCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATTACAATCACAGTGGAGCATTGATGCTGCGGGCTCAAACACTGGTGACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAATAGGCTCTTGGAGTTGAATCCATCCTCAGAGGTCTATCAAAATCTTCAAGCTCGCTTGAGGACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAGGAAGATGAGAAGGATGAGGTGATGCTAAAAAGAGAGAATAAAAAGGAAGAAATGGGAGAGAAATATGCGGCAACTTCTAATGTTAGGACATATCAAAAGGACGAGCTTGGAAAAGGTAGCGTCAGTGCTGTACGTGCTCCCCAGGAATCAGACCCCAATTTTTCATCCAAACAAGGAAGAGACCAAAATGATGAGCCTAAAAAGTCCCCAGCCGATGTTATAATTCCTAAAGCACCACATAGGGAATCAACCGAACAACAATCCAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGACAGTGTTGAAGATGATTCTAGTGAAGATGATGACGATGATAATGATGAAGAATCTTTGCCCCAGTACCGATTTCGAGTGAGAACAGTTGGTGTACGTCCTGTGAAGTAA 840 0.45 MATNKIERGHQMYRDGRYGEALGFYTEAITMAKTNQQKIALHSNRAACFLKLHDFKKAAEECTSVLELDYNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLRTQLSLAPIPESEEEFEEQEDEKDEVMLKRENKKEEMGEKYAATSNVRTYQKDELGKGSVSAVRAPQESDPNFSSKQGRDQNDEPKKSPADVIIPKAPHRESTEQQSKGWQTIPKPKGHSALDYARWDSVEDDSSEDDDDDNDEESLPQYRFRVRTVGVRPVK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01702 279 SMART tpr_5 73 106 IPR019734 GO:0005515
Rops7g01702 279 SMART tpr_5 39 72 IPR019734 GO:0005515
Rops7g01702 279 SMART tpr_5 2 35 IPR019734 GO:0005515
Rops7g01702 279 MobiDBLite consensus disorder prediction 246 261 - -
Rops7g01702 279 Pfam Tetratricopeptide repeat 51 116 - -
Rops7g01702 279 Gene3D Tetratricopeptide repeat domain 1 122 IPR011990 GO:0005515
Rops7g01702 279 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 279 - -
Rops7g01702 279 SUPERFAMILY TPR-like 6 119 IPR011990 GO:0005515
Rops7g01702 279 MobiDBLite consensus disorder prediction 146 266 - -
Rops7g01702 279 MobiDBLite consensus disorder prediction 193 219 - -
Rops7g01702 279 Coils Coil 125 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01702 2 120 Calmodulin-binding Proteins AT3G25230 32.824 9.08e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01702 - - gmx:100792046 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01702 7 26358471 26362007 Rops7g01702 7 26358471 26362007 ECH