Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01698 ATGTATGGTGGCTGCATACCAAAGTTTCAAGTCAGTTGTCAAGCAGGTGGGGATCAAGGTTCACAGGATGACCTATATACAATGAAAGAACTGCAGAACACTGATTGGCCCAAATATAATGAAACATTAGGTCCTCTTAGTTTACAAGAATGCAAGGAATCTTGTTTGCAAGACTGTTTATGTGTGTCGGTTTTTTTCAACCAAAGTTCCTGTTGGAAGAAGAAGCTCCCACTCTCTTATGGGAGGAAAGATTCGGGGGTACAAGGAATTTCTTTCATGAAATTGATCAAAAATGATTATCTCGCCTCCTTACCAAATAAGAAGAAGGATCATGATATTTTGATCACTCAGATGACAGTTCTTTTGTGTTGCTCTGGTTTCGTCATTTTAACATTGGTTGGTGCAATGTGTTTTTGGTTTTCGTACAACCGCAAGAAGATCAAAAGTAGTGGAACCAACAAAAGTTTTGTTGGTGAAAATTTGCGCAATTTTACCTTCGAAGAAATTGTAGAAGCAACAAACAACTTTAGAGAAGAATTGGGAAGGGGATCTTGTGGCATTGTCTACAAAGGAGTAATAGAGATGACTAGTGTGGCTGTTAAGAAATTACACAAGCTGTTCCAAGACAGTGATAAGGAATTTCAGACAGAAATGAATGTGATAGGTCAAACTCATCATAGGAACCTCGTTCGCCTTCTTGGATATTGCAATGAGGGACAACACCGGATTTTGGTGTATGAGCTAATGAGCAATGGTACTTTGGCAAGCTTCCTTTTCACCCCTTTGAAACCAAATTGGAACCAACGACTCCAAATTGTCCTTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGGATGTTGCACTCAGATCATACATTGTGACATAAAGCCACAAAATATACTTCTAGATGATCACTATAATGCCAAGATTTCAGATTTTGGGTTAGCAAAGCTATTATTTATTAATCAAAGCCATACTGAAACTGGAACCAGAGGAACCAAAGGGTATGTTGCACCGGATTGGTTTAGGAGTGCACCAATCACTACTAAGGTTGATACTTACAGTTTTGGCGTATTATTGTTAGAGATCATTTGTTGTAGGAAAAATGTTGAAAAAGAGATTGTTGATGAAGAAAAGGGCATTTTAACTGATTGGACATATGATTGCTACAAGAATGAAAGACTAGACATTCTTCTGGAAAATGATTGTGAGGCTGTCCATGACTTGAAGAGCTTGGAAAAGTATGTCTGA 1254 0.3836 MYGGCIPKFQVSCQAGGDQGSQDDLYTMKELQNTDWPKYNETLGPLSLQECKESCLQDCLCVSVFFNQSSCWKKKLPLSYGRKDSGVQGISFMKLIKNDYLASLPNKKKDHDILITQMTVLLCCSGFVILTLVGAMCFWFSYNRKKIKSSGTNKSFVGENLRNFTFEEIVEATNNFREELGRGSCGIVYKGVIEMTSVAVKKLHKLFQDSDKEFQTEMNVIGQTHHRNLVRLLGYCNEGQHRILVYELMSNGTLASFLFTPLKPNWNQRLQIVLGIARGLVYLHEGCCTQIIHCDIKPQNILLDDHYNAKISDFGLAKLLFINQSHTETGTRGTKGYVAPDWFRSAPITTKVDTYSFGVLLLEIICCRKNVEKEIVDEEKGILTDWTYDCYKNERLDILLENDCEAVHDLKSLEKYV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01698 417 CDD PAN_AP_plant 9 95 - -
Rops7g01698 417 ProSiteProfiles Protein kinase domain profile. 174 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01698 417 Pfam Protein kinase domain 177 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01698 417 SMART serkin_6 174 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01698 417 Gene3D Phosphorylase Kinase; domain 1 139 248 - -
Rops7g01698 417 FunFam Putative receptor-like protein kinase 249 417 - -
Rops7g01698 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Rops7g01698 417 FunFam S-receptor-like serine/threonine-protein kinase 143 248 - -
Rops7g01698 417 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 417 - -
Rops7g01698 417 SUPERFAMILY Protein kinase-like (PK-like) 157 374 IPR011009 -
Rops7g01698 417 Gene3D Transferase(Phosphotransferase) domain 1 249 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01698 Rops-Chr7 26234078 26235331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01698 120 417 Receptor kinase-like Gene Family AT5G45780 39.159 3.97e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops7g01698 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01698 - - mtr:25487002 667.151