Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01693 ATGCCCCTCTCTCCCTCTTCCATGGCTTCCATCCCTCACTTGTATTCAAACTACACCTTCACTTCTAATCTTTCTGGGTTCCCAACCCAATCAATGATCAATGGCAATACCTCAATTATGGACAATAATACCATGTGGGGTGGTCAAGATAGCTTAATGCCTGTGATGGATAATGGGGCTCTTGATCATATTGTGTCACTGGATTGTGATCCTATGTCTTCTTCTGCTTGGATGCCAACCTTTTCTGATCAACTTGGGGGCATTTCAGAGTTTTCCATGTCAGGCATTTCAGATTGTAAAATGGGCTTCTATGGTGGCATTGCAGGGTTTCAGAATTTCAATAGTAGATACCAACCACTTATGGGTGAGTTAGGGGAAGATTGTGGTGGTTTTGTGGAGGATATTAAACCACCTGCTTATCCTAATACTGCCAGAGAAAATTGGGGAATACAAGGTAATCAAATACCAGCAGTTGAAGAGCCTAACATAAAGGTGGGAAGGTACTCAGAAGAAGAAAGAAAAGAAAGAATTCTCCGATACTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCTGATCGGCGAGTCAGAGTTAGGGGAAGGTTTGCAAGAAACAATGGGGTATGTGAGGAAGACATGGCCACAAAAAAGCTTGAGAATCATCTTCACAAAGAAGACTTTTATGGTGGTGATTCAATCCAGTTCCAGTTAAAGAATGAGGAGGAGGATTGGCTGCAAGAGGCAATGGCAAGTTTGGTCTATTTATCTCATTCATCACCAGAAGATATGTGA 822 0.4136 MPLSPSSMASIPHLYSNYTFTSNLSGFPTQSMINGNTSIMDNNTMWGGQDSLMPVMDNGALDHIVSLDCDPMSSSAWMPTFSDQLGGISEFSMSGISDCKMGFYGGIAGFQNFNSRYQPLMGELGEDCGGFVEDIKPPAYPNTARENWGIQGNQIPAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNGVCEEDMATKKLENHLHKEDFYGGDSIQFQLKNEEEDWLQEAMASLVYLSHSSPEDM* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01693 273 Pfam CCT motif 173 215 IPR010402 GO:0005515
Rops7g01693 273 ProSiteProfiles CCT domain profile. 173 215 IPR010402 GO:0005515
Rops7g01693 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 130 225 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01693 Rops-Chr7 26147919 26149663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01693 169 221 C2C2-CO-like Transcription Factor Family AT5G15850 49.057 2.27e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops7g01693 CCT 8.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01693 - - gmx:102660475 410.994