Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01692 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGCGCAGCATGCAAGCTTCTTCGAAGGAGATGCTCACAGGATTGTGTGTTTGCTCCTTATTTCCCTGCAGATGAACCTCATAAGTTTGGCAGTGTCCACAAGGTTTTTGGAGCTAGCAATGTGAACAAAATGTTACAGGAATTACCAGAACACCAACGAAGTGATGCAGTTAGTGCAATGGTATATGAAGCCAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCAACAAGTTGATGTGCTTCAAACCCAATTGGCATTGGCACAAGCAGAGGTTGCACATATGAGAATGCAGCAATTCTCAACATCTTCAGATCAGCACCAACCATCAGTGCCTCCTGCAGCCTCCAATTCATCCTCACAGAACTTATACCAATCCTTGTGGTCATACTAG 456 0.4605 MKEGGRKQGAMSPCAACKLLRRRCSQDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSAMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVAHMRMQQFSTSSDQHQPSVPPAASNSSSQNLYQSLWSY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01692 151 Coils Coil 92 112 - -
Rops7g01692 151 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Rops7g01692 151 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Rops7g01692 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 134 - -
Rops7g01692 151 MobiDBLite consensus disorder prediction 119 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01692 Rops-Chr7 26101623 26105754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01692 1 120 AS2 family AT1G31320 85.000 3.04e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops7g01692 LOB 8e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01692 - - gmx:100803188 220.32