Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01643 ATGAAATCTAGCAGAGAGAAAGAGAAAGAGAATATCAATTCTCATATCCACACCCTCCATCGCCGTCTTCTCCATGCCTTAAACCTTGGCACCAGATATTTTGATGAGAAGACAAATAGATGGAATTGGCAGTGCGCCAACATTGAAGTCCAGAAAATTTTACTGCGATCCATGAATGCCTTTCTGGATTCTATATCATCTGATGCACGTGCGGCACGTCATACTATTGTTAAGGAATCTGTTGCTGATGTTATGAGAGCATTATTGTGGATTCTTCAAAGCAAAAGTGAGCCCTTGTTAAGCTCGGCATCGAATGTGGCAGTGAAGTTAGTTAGAGTTTTACCAAATTCACTATTGCAATCGCATATGGTGGATCTTGTCTATTGTCTATCATCCCTGCTATCTTCGCATCAAGTAGAAGTTGCAATACCCTGTGCTACTGCTTTGAATTTGGTAATCTCTAATTTGAGTGCTACAAATGAGAAGGCAGTTATGGAAGCATTGAAAGAAACAGAGATTACTGTCTGTATTGTTGGAAATATAAAAGATTTTGCCAGAGGTGCGAAGAAAATTGAATATTTTGAAGAGATGGCTTCACTTTTGAGCACAATACTGTTGCGGTGGCCTTCGTCTAGGCTCCCTGTTTGTAATGATGTTAAACTTATGAAAGTTTTAGCAAACATGCGTACAAGGACAGATAATTCTATTATACTTGTACTCTTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGCGAAAAAACTTATAGAGGATGGGAAAATATTTCTAGAATTGGTTGTGCGGGCGATGGGAAAATCAAACCCTCTTGATGTTCGGATAGAGGGGTTTAGGCTTTCTCAATGTCTATTGAGATCCCAGGAGAATTGTTTAAAAGTGCTGGATTTGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAAACAGGGCTTAGTTCAAAGAAAACTGGGAACAACCACGGTTCCTTATTAGTGGAAGCATGTCAGCTGGCTCTAATAACTCGTTGGGCCGGTGATCATCATATCAGTTTTTGGAAACAAGGAATTGATAGAGTCCTCCTTAATCTTCTGATTGAAAATATTCAAGACCAATCGTCTGAAGTTGTATTGTCATTAGAAAATCAAATATCCATGGTGAAAGAGGAACTGAAAGCCAATTATCATCTTGGTTTGAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTTAAATGGGAGTGAGCTCCACATCAACTTACTAATTATGTGTGCATGCTTGACCTTTGTGGATACAATTAAAAAATGGTGCCGAATATGTCAAAAGGATGATGACGATAATTTTGAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTACATATCGTCACATGCTAGATTCTTATTATCTGATATGCTGAAGGTGAAAGGCATGCCATGCTTAAAAAACTTAATACATACTCTAGATTATACATCATCCCTAGAAAACTATGGTTCATTTGATAAACTTCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTTCAAGTTTGCCACAGTATCAAAGATGTATCATTGAAAGCAAAGGGATAAAGGCAGTTGTTGTTATTGTGAAACGATGCTTAATTAATGAGATTCACGTAGAAAGGCCTGGCTTTGCTCTTCATCTGCGTACAACATTCCATGAAAGGTCTTGTTGCTGTTTTGGTAAAGGAGATTGGGAAGGTTCAGATGTCCTCTTATTTTATGGTTTGTGGGGTTTAGCTGAATTTCTTCATCAGTGTGGCCTTTTACAAGATAATCCTCAGCAATTTACTCAAGAGGTGACCACCATTAAAGCTGAATTAATTAGCATTCTTCATGAGGTCTGTAGTAGCACCTCTTTCAGTCAAGGAGTGAAATGGTATGCTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATAAATTTTCCGAAAGGATTGGGAAATCTCTTAATAAGGAAGAATATACAGATTTGCGACTCACTGTAGCAAACGGAGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTTTTGCCTCCTGAGGTATTATCTAGTAGTAAGAGTTCTAAAGAAGTGACCGAAAAGTTTGTTGGAGAGACCATGAGAGAAGTTCGTTTATCTTCTAACGTTGACTATAAAGCATTGGTGTTGTTGTTGGAATATGTATACTTGGGATGCTTCCATGCAGGAGAAGAAATGGTAAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAATCTACAGCCTCTCTTGCAAATGCTTTATAGACAATGTCCAAAGTGGGGTTCACCTTTCCCCGGCTTTAATCTTACTTCATCTCTAGATTCAGCGGGAAGTTGTTTTTCAGATGTCATATTGGAAACTAAATCGACGAATAGACTTGTTGGGTGGACATGCAATACTTGTTCCCACTCAGTACCACATTTGCATGCTCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTACAGGGTTTATTCCGATCAGGAATGCAAGAAAGTCATTCACAAGTCATAAAGGTTGATATTAGCTGGGAAGCATTGATGAAACTAGTACTGTGGTTTTATTCTGATGAGCTGCCAAATCCTCCCTCTGGATGTTTGTGGGATAATATGGATGATGAAGAAAAGCTATTCAATCTGCAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCATGTCTTAATTCTTCTAAGCAGTTGTCCATTAAAATAATCAAAATGGCTTATGAGCTCTCATTGTGGAAGTTGGTTGACATTGCTGCAAATCTCATGGCTCCTTCATATAGGCAATTACGAGATTCTGGTGAACTTGAAGAATTTGATGATGCACTAGTTCACTTAATTTATTCTGCTTCTATTAGACTTAACCAAGAAGGCAAAAGTTGCTTTAGGTGA 3042 0.3807 MKSSREKEKENINSHIHTLHRRLLHALNLGTRYFDEKTNRWNWQCANIEVQKILLRSMNAFLDSISSDARAARHTIVKESVADVMRALLWILQSKSEPLLSSASNVAVKLVRVLPNSLLQSHMVDLVYCLSSLLSSHQVEVAIPCATALNLVISNLSATNEKAVMEALKETEITVCIVGNIKDFARGAKKIEYFEEMASLLSTILLRWPSSRLPVCNDVKLMKVLANMRTRTDNSIILVLLKLYTSLALCDSVAKKLIEDGKIFLELVVRAMGKSNPLDVRIEGFRLSQCLLRSQENCLKVLDLCGEALVDAIICGMRETGLSSKKTGNNHGSLLVEACQLALITRWAGDHHISFWKQGIDRVLLNLLIENIQDQSSEVVLSLENQISMVKEELKANYHLGLRSYLWDILGWLTIHCGENLNGSELHINLLIMCACLTFVDTIKKWCRICQKDDDDNFESEPVSRAVLMMIYSPCNYISSHARFLLSDMLKVKGMPCLKNLIHTLDYTSSLENYGSFDKLQLVINLIGLTCLSSLPQYQRCIIESKGIKAVVVIVKRCLINEIHVERPGFALHLRTTFHERSCCCFGKGDWEGSDVLLFYGLWGLAEFLHQCGLLQDNPQQFTQEVTTIKAELISILHEVCSSTSFSQGVKWYASYILSYFGFYGFPNKFSERIGKSLNKEEYTDLRLTVANGDSVSVHGVILAVRCPSLLPPEVLSSSKSSKEVTEKFVGETMREVRLSSNVDYKALVLLLEYVYLGCFHAGEEMVKKLKILAKRCNLQPLLQMLYRQCPKWGSPFPGFNLTSSLDSAGSCFSDVILETKSTNRLVGWTCNTCSHSVPHLHAHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALMKLVLWFYSDELPNPPSGCLWDNMDDEEKLFNLQPYVELCWLAEFWILENIQEACWNVIMSCLNSSKQLSIKIIKMAYELSLWKLVDIAANLMAPSYRQLRDSGELEEFDDALVHLIYSASIRLNQEGKSCFR* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01643 1013 Pfam BTB/POZ domain 676 785 IPR000210 GO:0005515
Rops7g01643 1013 Pfam BTB/POZ domain 840 905 IPR000210 GO:0005515
Rops7g01643 1013 SUPERFAMILY POZ domain 840 940 IPR011333 -
Rops7g01643 1013 SMART BTB_4 684 794 IPR000210 GO:0005515
Rops7g01643 1013 SMART BTB_4 814 943 IPR000210 GO:0005515
Rops7g01643 1013 SUPERFAMILY ARM repeat 48 421 IPR016024 -
Rops7g01643 1013 CDD BTB_POZ_ZBTB_KLHL-like 813 892 - -
Rops7g01643 1013 ProSiteProfiles BTB domain profile. 684 764 IPR000210 GO:0005515
Rops7g01643 1013 Gene3D Potassium Channel Kv1.1; Chain A 808 983 IPR011333 -
Rops7g01643 1013 ProSiteProfiles BTB domain profile. 814 896 IPR000210 GO:0005515
Rops7g01643 1013 Gene3D Potassium Channel Kv1.1; Chain A 666 789 IPR011333 -
Rops7g01643 1013 SUPERFAMILY POZ domain 662 785 IPR011333 -
Rops7g01643 1013 PANTHER OS06G0674800 PROTEIN 5 1008 IPR044953 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops7g01643 BTB 0.00027 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01643 - - mtr:25487018 1635.93