Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01614 ATGCTTATATTAGTGGGAAACGTGCAAGGAACAATGAGTTCTGTTGTTTCCCCTGTGAGCTTGGGGAGCCTCATGAGTGTGAGTTCCTCTGGAAGGTCCCATTCTGTTGTGAGGAGAGTATCTCTTTCTAGAGGGAACAGTAAAAGGAACAAGAGATGGCATTGTGTTTCATTGTCTGTGTGTAGATATTCAGTGACCACAACTGATTTTGTTGCTGACCAAGGCAATTCAGTGTCCCTTGATTCTAACAGTAGTAGTAAAGGTGGTGATAATAGTGCTGGTTTTGTCCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTCCTCAGACAATAAAGGTGACTCCATTTTAGGCTCGAGTTCAGGAAGTTGGGGCAATTCAAGGAATACTGAGGACCCTGATGATGTAGAAGAGAGGAATAAGGTGATTGAATCACTTGGTGAGGTGTTGGAGAAGGCTGAAAAGTTGGGAAATTCTAAGTTGGATGATGAAAGGAATAATGGTTCAGCAAATAAACCAACAAGATCTGATACAAATGCTGATAAGCCTAAGGCTGATAAACCAGTGAATTCAACAAAAACTCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACGGTTGCAGCCGTGCAGAAGGTTGTGAAGGAAGTACCAAGGCCTAATAGCAAGAATGGAGAGGGGAAATCTCACATAGGGGGAGGGGAGAAGGTAACATCTCAGTATCGTGCTCCCCAGCCTCCATCAAAACCTCAACCAATGTTACAAGCTAAGCCTTCTATAGCTCCTCCACCGATAAAAAAGCCTGTTGTCTTGAAGGATAAGGGGGAAGGTGAAACATCTGTTAAAACTAAAGAAAGGAAGGGGCCCATCTTGATTGATAAGTTTGCTGCCAAGAAACCAGTAGTTGATCCTCTAATTGCTCAAGCAGTTCTAGCCCCTCCAAAACCAGGGAAGGCCCCTCCTCCAGGAAAGTTTAAAGATGATTACCGGAAGAAAGGTGCTCCTGCTGGGGGAGGACCAAGAAGAAGAATGGTAGAGGATGATGATGATGTGATTCCTGATGAGGACACATCAGAACTCAATGTCTCTATTCCTGGTGCTGCAAGAAAAGGAAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTCAGGGCTGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTTGGTGACAAAGGTATGCTGGTGGAGGAGTTAGCATACAATTTGGCAATCAGTGAAGGTGAAATCCTGGGTTTGCTATACTCTAAGGGGATTAAACCAGATGGGGTACAAACTCTAGACAGAGATATGGTGAAGATGATTTGTAAAGAGTATGATGTTGAAGTCATGGATGCTGATCCTGTCAACGTTGAAGGATTAGTGAAGAAAAGGGAAATTCTTGATGATGATGACCTTGACAAACTCAAATATAGGCCTCCTGTCATTACTATTATGGGCCATGTAGATCATGGCAAGACAACTCTTTTGGATCATATACGGAAGACCAAGGTAGCTGCTTCTGAAGCTGGTGGAATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGCAAACAGTTGCCCTGTGTTTTCCTTGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGTGTAACAGACATTGCCATTATTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCACGCCAAAGCAGCAGGAGTACCCATAATCATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGTGGTGACATCCCTATGGTTCAGATAAGTGCTCTTCAAGGGAAGAATATAGATGATCTTTTGGAAACTGTGATGCTTGTTGCTGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGAACAGTCATTGAGGCAGGGCTAGATAAATCAAAAGGACCATTTGCCACTTTTATTGTGCAGAATGGCACCCTTAGAAAGGGAGATATAGTGGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTTGATGTAGCTACACCTTCAATACCTGTACAGGTTATTGGATTGAATAATGTTCCTATTGCTGGTGATGAATTTGAGGTTGTTGATTCCCTTGATACTGCACGTGAAAGGGCAGAGTCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCATTAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGACTAGATTTGCACCAGCTAAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTAAGGCAAGCACTGCAGGTGCTACCACAAGATAATGTCACACTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAACACAAGTGACGTTGACCTTGCAGTTGCAAGCAAAGCTATAATTTTTGGATTTAATGTCAAAGCACCAGGATCAGTCCAAAGCTATGCAGAGAATAAAGGTGTTGAGATTAGAGTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAAAGCAATGGAAGGACTCCTGGAGCTTGTTGAGGAACAATTAATGATTGGCTCAGCAGTAGTACGGGCCACATTCAGCAGTGGTAGTGGCCGTGTTGCTGGATGTATGATTACAGAGGGAAAGGTACAAAATGACTGCGGTATTCGAGTCATTCGGAAGGGGAAAGTAATTCATGTTGGTATTCTTGACTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGGGTTAGAAGACTTTGATGATTGGGAAGAGGGTGATATTCTAGAAGCCTTCAACACAGTTCAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAAGGAGTAGGAGTTAAACTATAG 3042 0.4356 MLILVGNVQGTMSSVVSPVSLGSLMSVSSSGRSHSVVRRVSLSRGNSKRNKRWHCVSLSVCRYSVTTTDFVADQGNSVSLDSNSSSKGGDNSAGFVLKPPPKPVLKSSDNKGDSILGSSSGSWGNSRNTEDPDDVEERNKVIESLGEVLEKAEKLGNSKLDDERNNGSANKPTRSDTNADKPKADKPVNSTKTQKSKTLKSVWRKGDTVAAVQKVVKEVPRPNSKNGEGKSHIGGGEKVTSQYRAPQPPSKPQPMLQAKPSIAPPPIKKPVVLKDKGEGETSVKTKERKGPILIDKFAAKKPVVDPLIAQAVLAPPKPGKAPPPGKFKDDYRKKGAPAGGGPRRRMVEDDDDVIPDEDTSELNVSIPGAARKGRKWSKASRKAARLRAAKDAAPVKVEILEVGDKGMLVEELAYNLAISEGEILGLLYSKGIKPDGVQTLDRDMVKMICKEYDVEVMDADPVNVEGLVKKREILDDDDLDKLKYRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPVDGKQLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALQGKNIDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLRKGDIVVCGEAFGKVRALFDDGGKRVDVATPSIPVQVIGLNNVPIAGDEFEVVDSLDTARERAESRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLEATGDVNTSDVDLAVASKAIIFGFNVKAPGSVQSYAENKGVEIRVYRVIYELIDDVRKAMEGLLELVEEQLMIGSAVVRATFSSGSGRVAGCMITEGKVQNDCGIRVIRKGKVIHVGILDSLRRVKEIVKEVNAGLECGLGLEDFDDWEEGDILEAFNTVQKKRTLEEASASMAAAVEGVGVKL* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01614 1013 MobiDBLite consensus disorder prediction 74 91 - -
Rops7g01614 1013 Pfam Translation initiation factor IF-2, N-terminal region 409 455 IPR006847 -
Rops7g01614 1013 CDD mtIF2_IVc 903 985 - -
Rops7g01614 1013 NCBIfam small GTP-binding protein domain 487 647 IPR005225 GO:0005525
Rops7g01614 1013 Gene3D Translation factors 660 776 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 111 128 - -
Rops7g01614 1013 Gene3D - 481 659 IPR027417 -
Rops7g01614 1013 SUPERFAMILY Translation proteins 660 743 IPR009000 -
Rops7g01614 1013 Gene3D Translation factors 897 994 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 176 190 - -
Rops7g01614 1013 SUPERFAMILY Translation proteins 900 993 IPR009000 -
Rops7g01614 1013 PRINTS GTP-binding elongation factor signature 592 601 IPR000795 GO:0003924|GO:0005525
Rops7g01614 1013 PRINTS GTP-binding elongation factor signature 556 567 IPR000795 GO:0003924|GO:0005525
Rops7g01614 1013 PRINTS GTP-binding elongation factor signature 488 501 IPR000795 GO:0003924|GO:0005525
Rops7g01614 1013 PRINTS GTP-binding elongation factor signature 540 550 IPR000795 GO:0003924|GO:0005525
Rops7g01614 1013 Pfam Elongation factor Tu GTP binding domain 489 649 IPR000795 GO:0003924|GO:0005525
Rops7g01614 1013 MobiDBLite consensus disorder prediction 155 169 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 314 360 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 271 287 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 155 287 - -
Rops7g01614 1013 NCBIfam translation initiation factor IF-2 406 995 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Rops7g01614 1013 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 166 1001 IPR015760 -
Rops7g01614 1013 CDD IF2_mtIF2_II 664 758 IPR044145 -
Rops7g01614 1013 FunFam Translation initiation factor IF-2 660 778 - -
Rops7g01614 1013 Gene3D - 792 895 IPR036925 -
Rops7g01614 1013 Hamap Translation initiation factor IF-2 [infB]. 7 993 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Rops7g01614 1013 Coils Coil 743 770 - -
Rops7g01614 1013 CDD IF2_eIF5B 487 653 - -
Rops7g01614 1013 ProSitePatterns Initiation factor 2 signature. 946 968 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Rops7g01614 1013 MobiDBLite consensus disorder prediction 74 137 - -
Rops7g01614 1013 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 791 903 IPR036925 -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 247 267 - -
Rops7g01614 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 660 IPR027417 -
Rops7g01614 1013 FunFam Translation initiation factor IF-2 897 994 - -
Rops7g01614 1013 FunFam Translation initiation factor IF-2 481 659 - -
Rops7g01614 1013 MobiDBLite consensus disorder prediction 323 350 - -
Rops7g01614 1013 Pfam Translation-initiation factor 2 792 885 IPR023115 -
Rops7g01614 1013 FunFam Translation initiation factor IF-2 792 896 - -
Rops7g01614 1013 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 484 657 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01614 Rops-Chr7 24681354 24689553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01614 485 883 Eukaryotic Initiation Factors Gene Family AT1G76810 29.724 3.05e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01614 K02519 - gmx:100778924 1488.4