Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01613 ATGGAGGATAATCAATGGAATCTCTATGATCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAACAAGAAACCTCTTCTTCCACTACTACTCACTGCTCCAATTATATTTCACGATCATCACTGAATTCTCAGAGTTCGGCTATGGCGGAGGATCATCAGTCTCGTGGTAGCAGCCCAAATTACGGATTCTCTCTGAAAAATGGAAGCTTTAAAAGGAACAGCTTGCAATTTGATGACCCAGTTGTGAAAAATGTGGTTGATGGAAGATCGCTATTGGGGTATTCTCTAACTTCTCCAGATTTGGTTATCTGTGCTGGCTCACCAGAATTTGCTGGAATCAGCTATGGTGGTGACTCTCCTGAGTTGTTGAAGAACAAAAATTGCAAGAATTTAGAGTCATCCATGGAGCTTTCTCTAGAGAATGGAATCAATGGTTCTGAGGTTGAAGTTGACAATGGCCATAATAAGACCCCAACCGTTAAATTCTCCAATTTGTGTCAAACTTTTGAACTAAAGGACGAACTGTTATCCCCTGAAGCCTCCTTTGAGCTTCTTCCTCCACCGGTAACCAAGGATGAGTCACCCCAAGACCTCCCTTCTAGAGATAATGAAATGCTAGAAGATGTTGGAGTGTCTCAAGAGGCTGAATTGGAGCCCTCAGAAGATGCTGAGGATATTGCGGTGGAAGAGAAGTTTCAGAAGCTGAAAAGAGAATTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGGGAGATCAAGAAAGAGAATCAACAGAAGAGTAGAGAATGCCAAAAAGCTTGGAACTCCTTAAAAGAGCTCCAGAATGAGCTAATGCGCAAGTCCATGCACGTCGGATCTTTAGCATTTGCCATTGAGGGGCAAGTTAAAGAGAAAAGCAAGTGGTTTTCGTCACTGAGAGACTTGACCAGGAAATTGAAGATTATGAAAATGGAACAAATCAAGCTATTAGAGGAAGCGGAGGCATACAAGAAATATGAAGCAGAAATGATTGAAATGGGGCTTATCTTAAAGTCTAAAATAAATGAACAACTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGACTAAGGAAAGAAAAGAGCTTTACAATAAGATATTGGAGCTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTTTCAATGCTGAAGAGATAAAATCAGGAGCCACTATGGCCTTGGATTTTGATTCTGCTAAAGATGGTGAGCTTACTGTTATGTCAAATGGAGCTCCTAAAAAAACTTTTAAGTTTGATGCTGTCTTTGGCCCCCAAGCTGAGCAAGCTGATATTTTTGAAGACACAGCATCATTTGCAACCTCAGTTCTAGATGGGTACAATGTATGCATTTTTGCATATGGGCAAACCGGGACAGGAAAAACTTTCACGATGGAGGGCACCGAAGAGGCTCGTGGAGTTAATTTCAGAACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGACAGATGCTCTATCATTATGATATCTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTTCAGGAAATCAGCCAGGAATGGCTTCAAAAAGATTGGAAATAAGGCAAGCTAGTGAAGGAATGCATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAACATGAGTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCCAATGATTACAGCAGCCGATCTCACTGCATTCACTGTGTTATGGTTAAGGGTGAGAATTTGCTGAATGGAGAACACACAAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGTGAACGAGTTGCAAAGACAGAAGTTCAAGGTGATAGACTGAAGGAGACACAAAATATTAATAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACCAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTCACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATAAGTCCTAATGAAAATGACTTGAGTGAGACGATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGGGGAATAGAACTAGGCCCTGCCAAAAAGCAGTTGGACACTACTGAACTTCTGAAACACAAACAGATGGCTGAGAAAACCAAACAAGAGGTTAAACTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTTCAAGATGAAGGAAAAAGATAATAAAAACAAAATTCTGCAAGACAAGGTCAAGGAACTGGAACCCCAACTTCTTATTGAGAGAAAACTAGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACATCAAGAAGAGCAAAATAGTACAGTTATGAGACCAGCACTTGCAAATAGACCACTAGGAACTCTGAAGAATTTCAATGATCCAGCTAGTGGCGGATGGTGCAAAGACCAAGCAAATTCAGCTAGACCACTTATGGAGAACAACATCTTAAAACCACCTCATCTACCTTTTTCTACAATGGAGAGCTCCATCAAGTACATTGATCAAACTGAGAAAGAAAACAATCCTGACATGGCTGAAAAAGCACTATTGCCAAAAAGGGCTGGAAGAGCTTCTATCTGCACAATGACACCACGTGTTCCTTCAGCCATTGCTTCAAGGCGCAACTCTTTGATTCCACTCCCAAGTATACCTAGCTTAACACAGCTCCAATCACCATTGTTACCAAAGTTTACAAACCAAGCTGATCAGAAAGATGTCAATGGAGAATCTGAAACCAACTGTTTGCCACCACAGACTCATTGTGAGAGTCCCAAAGAAGTAAGAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGTCTACATAAGAAAATACAGGTTAAGTCTCCATTGCAGCAACACATGAGAAAGGTTGGTATAAATGTAGGGATGGAGAAAGTTAGAGTTTCCATCGGAAGTAGAGGGAGATTGGCACAAAGGGTGCAAGTGGGAAATGGTAGAAGAGGTGGAGCCAAAGAGATTCAACAAAAGAATAGTCAAAAGGAAAAGGAAAGGGGATGGATATAA 3144 0.4151 MEDNQWNLYDHDPLLLTDVSLQQETSSSTTTHCSNYISRSSLNSQSSAMAEDHQSRGSSPNYGFSLKNGSFKRNSLQFDDPVVKNVVDGRSLLGYSLTSPDLVICAGSPEFAGISYGGDSPELLKNKNCKNLESSMELSLENGINGSEVEVDNGHNKTPTVKFSNLCQTFELKDELLSPEASFELLPPPVTKDESPQDLPSRDNEMLEDVGVSQEAELEPSEDAEDIAVEEKFQKLKREFECQRKELAETRRELGEIKKENQQKSRECQKAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLTRKLKIMKMEQIKLLEEAEAYKKYEAEMIEMGLILKSKINEQLESHEDLKSKYIEGTKERKELYNKILELRGNIRVFCRCRPFNAEEIKSGATMALDFDSAKDGELTVMSNGAPKKTFKFDAVFGPQAEQADIFEDTASFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQMLYHYDISVSVLEVYNEQIRDLLVSGNQPGMASKRLEIRQASEGMHHIPGLVEAHVNNMSEVWEVLQTGSNARAVSSTNANDYSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQLDTTELLKHKQMAEKTKQEVKLKDLQIKKMEETIHGLEFKMKEKDNKNKILQDKVKELEPQLLIERKLARQHVDSKIAEQHQMKHQEEQNSTVMRPALANRPLGTLKNFNDPASGGWCKDQANSARPLMENNILKPPHLPFSTMESSIKYIDQTEKENNPDMAEKALLPKRAGRASICTMTPRVPSAIASRRNSLIPLPSIPSLTQLQSPLLPKFTNQADQKDVNGESETNCLPPQTHCESPKEVRSGVKKIGSILRRSLHKKIQVKSPLQQHMRKVGINVGMEKVRVSIGSRGRLAQRVQVGNGRRGGAKEIQQKNSQKEKERGWI* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01613 1047 ProSitePatterns Kinesin motor domain signature. 612 623 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops7g01613 1047 Coils Coil 310 330 - -
Rops7g01613 1047 Coils Coil 233 267 - -
Rops7g01613 1047 FunFam kinesin-like protein KIN-14R 331 714 - -
Rops7g01613 1047 MobiDBLite consensus disorder prediction 1015 1047 - -
Rops7g01613 1047 Gene3D Kinesin motor domain 330 714 IPR036961 -
Rops7g01613 1047 Pfam Kinesin motor domain 392 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 750 IPR027417 -
Rops7g01613 1047 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 PRINTS Kinesin heavy chain signature 582 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 MobiDBLite consensus disorder prediction 1033 1047 - -
Rops7g01613 1047 MobiDBLite consensus disorder prediction 181 203 - -
Rops7g01613 1047 ProSiteProfiles Kinesin motor domain profile. 386 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 CDD KISc_C_terminal 384 714 - -
Rops7g01613 1047 PANTHER KINESIN-LIKE PROTEIN KLP-3 201 922 IPR027640 GO:0003777|GO:0007018
Rops7g01613 1047 SMART kinesin_4 384 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops7g01613 1047 Coils Coil 733 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01613 Rops-Chr7 24669415 24675016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01613 361 739 Calmodulin-binding Proteins AT5G65930 42.147 3.04e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01613 K10406 - gmx:100817247 1713.74