Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01612 ATGGATGAACCAACATTGTTGTTCCCAGACACAGACCTTGATCTAAGTTTCACCAGCACCACCACTGATCACACTTTCACATCTTCTAGTGCCCGCGCCAGCTTAGAGCGGACCAGCAGTCTCAACTTCAGCTTTAACGACCGCCTTTCCACTGCCAATTCCGCCGCATCCTCCATCGTATTCCGTCGTCCCCATCGGAGTTCTGACCCTCAATGGTCCGCCATCAAGGCGGCAACCACCATGTCCTCCGACGGCCGACTCCACCTCCGTCACCTCAAGCTCCTCCGGCACCTCGGCTCCGGGAACCTCGGTCGTGTCTTCCTCTGCCGACTCCGCGACTATGACGGCGCAAATTTCGCTCTCAAGGTTGTTGACAAGGATCTACTAACTCCCAAGAAGCTCTCACATGCAGAAACTGAAGCAGAGATCCTCCACGCCCTTGATCACCCGTTCCTTCCCACGCTCTACGCACGTATCGATGTTTCCCACTACACTTGCCTCCTCATTGATTATTGCCCCGGCGGCGACCTCCACTCTCTCCTCCGTAAACAGCCCGGTAACCGCCTCTCCCTCACGGCGGCGCGTTTCTTCGCGGCCGAGATCCTCGTCGCGTTAGAGTATCTCCACGCGCTTGGGATCGTGTACCGCGATTTAAAACCAGAGAACGTTCTGTTACGCGAGGATGGCCACGTCATGCTTTCCGATTTTGACCTTTGCTTCAAAGCTGACGTGGCACCCACCTTTGAATGCCACCACACCCATAACAAACCCCACGTGGGACCCACTGGTGGGGAATGCTTAGGTTTGTCCATGGTAGTGGCTAGGTTTGTTCAAATGGCGGTCATGATAATTTGGTTTGGTGAAATTTGGGGCTACATAGTACTGATGTCAGATTTAGGTGAATTAGGGGTGTTCTAG 918 0.5414 MDEPTLLFPDTDLDLSFTSTTTDHTFTSSSARASLERTSSLNFSFNDRLSTANSAASSIVFRRPHRSSDPQWSAIKAATTMSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGANFALKVVDKDLLTPKKLSHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLRKQPGNRLSLTAARFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPTFECHHTHNKPHVGPTGGECLGLSMVVARFVQMAVMIIWFGEIWGYIVLMSDLGELGVF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01612 305 Gene3D Phosphorylase Kinase; domain 1 91 175 - -
Rops7g01612 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Rops7g01612 305 FunFam Serine/threonine-protein kinase OXI1 176 244 - -
Rops7g01612 305 PANTHER FLIPPASE KINASE 1-RELATED 33 252 - -
Rops7g01612 305 ProSiteProfiles Protein kinase domain profile. 92 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01612 305 SUPERFAMILY Protein kinase-like (PK-like) 70 243 IPR011009 -
Rops7g01612 305 SMART serkin_6 92 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01612 305 FunFam Serine/threonine-protein kinase WAG2 91 175 - -
Rops7g01612 305 Pfam Protein kinase domain 94 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01612 305 Gene3D Transferase(Phosphotransferase) domain 1 176 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01612 Rops-Chr7 24652753 24656065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01612 1 249 AGC Kinase Gene Family AT3G14370 72.222 1.96e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g01612 Pkinase 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01612 - - lja:Lj0g3v0200189.1 415.616