Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01611 ATGGCATTATTGGAGTGGAGTTTCCACTCCCATATTGGGTTTTACATGATGCTATTATTTTGCCTTGGCATCATCCTTGTAAGTTCAATTAATGAAGAGGGTTCAACCCTTTGGAAGTTCAAAAGTTCCCTTTTAGACCCAAATAACAATCTTCTTAACTGGAATCCTTCTGATTTTACTCCTTGCAATTGGACTGGTGTGTTTTGCACAGGTTCAGTGGTAACTTCTGTTAAACTTTACAACCTTAATCTCTCTGGTACTTTATCTCCTACCATCTGTAATCTTCCAAGGTTACAAGAGTTGAATCTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGAGGGTTTTGTTGACTGTCATAGTTTAGAGATTTTAGACCTTTGTACTAATAGGCTTCATGGACTACTACTCACCCCTATTTGGAAAATCACAACACTTAAAAAGCTTTACCTGTGTGAAAATTATATGTATGGTGAAGTGCCAGAAGGGGTTGGGAATTTAATATCACTTGAAGAGTTAGTCATTTATAGCAATAATTTAACTGGGAGTATTCCCACTTCAATCAGTAAGTTGAAGCAGCTTAGAGTTATAAGGGCAGGTCTGAATGGCTTCTCAGGGCCAATACCTGCAGAAATTAGTGAATGTGAAAGTTTGGAGACATTGGGTTTGGCACAGAATCAACTAGTAGGTTCAATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACCAATTTGATTCTTTGGCAAAACTCTTTATCTGGGGAAATTCCTCCTGAGATTGGAAATATTAGGAGCCTGGAATTGCTTGCTTTGCATCAAAATGCATTAATTGGTGCTGTCCCTAAGGAACTTGGAAAGCTATCCCAGTTGACGAGGTTGTACATGTACACCAACCAGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGTACAAATGCCATTGAGATAGACCTATCTGAGAACCGTTTGATTGGGATCATTCCCAAAGAGTTGGGTCAGATCTCTAATCTTAGCTTGCTTCATCTATTTGAAAACAATCTGCAGGGTCACATTCCAAGGGAACTTGGGCAGTTGAGGCTGCTAAAAAATTTAGACATGTCACTTAATAACTTAACAGGTACAATTCCACTGGAGTTTCAAAATCTTACATACATGGAGGATTTGCAGCTATTTGACAATCAACTTGAGGGTGTGATTCCTCCTCATCTTGGAGCTGTTAGAAACCTTACTATTCTTGATATATCTGCAAATAATCTTGTTGGTATGATACCTGCCCATCTTTGTGAATATCAGAAGCTGCAATTTCTTAGCCTTGGGTCAAATAGGTTGTTTGGAAATATTCCTTATAGCCTGAAAACTTGCAAGTCTCTTGTGCAGCTAATGCTGGGGGATAACCAGTTAACAGGAAGCCTACCTGTTGAATTGTTTGAGCTTCACAATCTTACCGCACTTGAACTTTATCAAAATCGATTCTCGGGGTTAATAAAGCCGGGGATAGGTCAACTAAGGAATTTAGAGAGGCTTCACTTGTCAGATAACTATTTTACTGGGTATCTCCCTTCTGAGATTGGAAATTTAGCACAACTTGTCTCATTCAATGTTTCCTCTAATAATTTCAGTGGAAATATTCCTCATGAATTGGGAAACTGTGTAAAACTGCAGAGGCTTGATCTCAGCAGGAACCAGTTCACTGGTATGCTTCCAAATGAAATTGGCAATCTTGTGAATTTGGAGCTGTTGAAAGTTTCTGATAATATGCTTTCTGGAGAAATACCAGGCACTTTGGGTGATCTTATTCGTCTCACTGACCTTGAGCTTGGTGGAAACCAATTTTCAGGAAGCATCTCTTTTCATTTTGGAAGACTTGCTGCTCTTCAGATTGCACTTAACCTGAGCCACAACAAACTTTCAGGAACAATTCCTGATAGTTTAGGGAACTTGCCAATGCTAGAATCCCTTTACTTAAATGACAATCAACTTGTTGGTGAAATTCCTGCATCAATTGGTGACCTTCCTAGTCTTTTAGTATGCAATGTGTCAAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAATTTTGCTGGGAACAACGGGTTGTGCCGTGTAGGTACCTATAACTGTCATCCATCTTTAGCACCATCTCATCATGCAAAACCAAGTTGGATCAGAAATGGTTCATCAAGGGAAAAGATTGTGACCATTGTTTCTGGGGTGGTTGGATTAGTTTCTCTTATTTTCATAGTATGCATATGTTTGACAATGAGGCAGCATAGCCCTTCTTTTGTTTCACTTGAAGGACAAACAAAGCCTCATGTCTTGGATAACTATTACTTTCCTAAAGAAGGCTTCACATACCAGGATCTCTTGGAAGCCACTGGCAATTTTGCAGAAGCTGCAGTTATAGGAAGAGGAGCTTGTGGAACTGTATACAAGGCTGTTATGAATGATGGTGAAGTGATTGCTGTCAAGAAGCTGAATTCACGCGGAGAAGGAGCAAATGTTGATCGAAGTTTCCTTGCAGAGATTTCAACCCTTGGAAAGATCAGGCACAAGAACATTGTGAAGCTGCATGGATTTTGTTATCACGAGGATTCTAATCTTCTCTTATATGAGTACATGGAAAATGGAAGCCTAGGGGAACAACTTCATTCAAGTACAAGCACGTGTGCATTGGATTGGAGTTGTAGATATAACATTGCTTTGGGAGCAGCTGAAGGCTTATGTTATCTTCATTATGATTGTAAACCTCAAATCATCCATCGTGATATTAAGTCAAACAACATTTTACTTGATGAAGTGTTTCAGGCTCATGTTGGAGACTTTGGCTTGGCTAAGTTGATTGACTTTTCCTACTCAAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGTTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAGGGTGGTGATTTAGTGAATTGGGTGAGAAGATCAATTCAAGCATCTGTACCAACATCTGAATTATTTGACAAGAGGTTGAATCTGAATGAACAAAGAACAGCTGAAGAGATGTCTCTTATTCTCAAAATTGCTTTGTTTTGCACCAGTGCATCTCCACTTAATAGGCCTACAATGAGAGAGATGAAAATGAAGGTTCTTCTTCCTAAGATGGGGGTCTTGATTTGTGAGTTCCAAGCTTCACTCTCATCATTCAAGAAGGGTACGCCATCATTTCTACATGTTTGA 3324 0.3968 MALLEWSFHSHIGFYMMLLFCLGIILVSSINEEGSTLWKFKSSLLDPNNNLLNWNPSDFTPCNWTGVFCTGSVVTSVKLYNLNLSGTLSPTICNLPRLQELNLSKNFISGPIPEGFVDCHSLEILDLCTNRLHGLLLTPIWKITTLKKLYLCENYMYGEVPEGVGNLISLEELVIYSNNLTGSIPTSISKLKQLRVIRAGLNGFSGPIPAEISECESLETLGLAQNQLVGSIPRELQKLQNLTNLILWQNSLSGEIPPEIGNIRSLELLALHQNALIGAVPKELGKLSQLTRLYMYTNQLNGTIPPELGNCTNAIEIDLSENRLIGIIPKELGQISNLSLLHLFENNLQGHIPRELGQLRLLKNLDMSLNNLTGTIPLEFQNLTYMEDLQLFDNQLEGVIPPHLGAVRNLTILDISANNLVGMIPAHLCEYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNQLTGSLPVELFELHNLTALELYQNRFSGLIKPGIGQLRNLERLHLSDNYFTGYLPSEIGNLAQLVSFNVSSNNFSGNIPHELGNCVKLQRLDLSRNQFTGMLPNEIGNLVNLELLKVSDNMLSGEIPGTLGDLIRLTDLELGGNQFSGSISFHFGRLAALQIALNLSHNKLSGTIPDSLGNLPMLESLYLNDNQLVGEIPASIGDLPSLLVCNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTYNCHPSLAPSHHAKPSWIRNGSSREKIVTIVSGVVGLVSLIFIVCICLTMRQHSPSFVSLEGQTKPHVLDNYYFPKEGFTYQDLLEATGNFAEAAVIGRGACGTVYKAVMNDGEVIAVKKLNSRGEGANVDRSFLAEISTLGKIRHKNIVKLHGFCYHEDSNLLLYEYMENGSLGEQLHSSTSTCALDWSCRYNIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVNWVRRSIQASVPTSELFDKRLNLNEQRTAEEMSLILKIALFCTSASPLNRPTMREMKMKVLLPKMGVLICEFQASLSSFKKGTPSFLHV* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01611 1107 Pfam Leucine rich repeat 601 661 IPR001611 GO:0005515
Rops7g01611 1107 Pfam Leucine rich repeat 504 564 IPR001611 GO:0005515
Rops7g01611 1107 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 882 - -
Rops7g01611 1107 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Rops7g01611 1107 ProSiteProfiles Protein kinase domain profile. 805 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01611 1107 Gene3D Ribonuclease Inhibitor 383 722 IPR032675 -
Rops7g01611 1107 Gene3D Ribonuclease Inhibitor 292 382 IPR032675 -
Rops7g01611 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Rops7g01611 1107 Gene3D Transferase(Phosphotransferase) domain 1 883 1082 - -
Rops7g01611 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 472 1074 - -
Rops7g01611 1107 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 883 1083 - -
Rops7g01611 1107 SMART serkin_6 805 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01611 1107 SUPERFAMILY RNI-like 365 687 - -
Rops7g01611 1107 SMART LRR_typ_2 167 191 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 648 672 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 407 431 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 95 119 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 287 311 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 503 527 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 551 574 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 239 263 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 575 599 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 455 479 IPR003591 -
Rops7g01611 1107 SMART LRR_typ_2 335 359 IPR003591 -
Rops7g01611 1107 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 409 721 - -
Rops7g01611 1107 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 182 280 - -
Rops7g01611 1107 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 30 181 - -
Rops7g01611 1107 Gene3D Phosphorylase Kinase; domain 1 773 882 - -
Rops7g01611 1107 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 281 383 - -
Rops7g01611 1107 Gene3D Ribonuclease Inhibitor 26 80 IPR032675 -
Rops7g01611 1107 Gene3D Ribonuclease Inhibitor 81 291 IPR032675 -
Rops7g01611 1107 SUPERFAMILY L domain-like 32 300 - -
Rops7g01611 1107 Pfam Protein kinase domain 807 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01611 1107 SUPERFAMILY Protein kinase-like (PK-like) 782 1075 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01611 Rops-Chr7 24639551 24644605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01611 55 1073 Receptor kinase-like Gene Family AT1G73080 38.224 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops7g01611 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01611 - - gmx:100818311 1862.81