Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01605 ATGGCTTCTATCAAAAACTCCAACTCTGAAACCCAAATTCCATCAGAGCTTCTGATAGCCCAGATCATGCAACTTCATGCATGCCTCTCTGAGCTTGAATCTCTTAAGCCTTCTAAGCAAGTCAATAGCCTGTTGAGTCGCCTAGTGAAACTGTGCACCCTCCCTTCATCCATTGACATTGAGTCTTTGCCCCAGGAGGGTCTGATCATGCGTGAGAGCCTCATTGATCTTTGTGGTCGTGCTGAAGGGCTTTTAGAGCTTGAGTTCTCAACTTTCATAGGCCACACACCCAACCCATTGAACAACTTAACTCTTTTCCCATACTATGGGAACTATGTCAAACTAGCAAACATGGAGAACAAAATCCTCAAGGAAAATGGTTTGGAGAATGCAAAAAAGGTTGCATTTGTTGGGTCTGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCATCACATGGACTCAATCCACTTGGATAACTTTGACATTGATGAAAAGGCGAATGAGGCAGCTCGTAAGCTTGTTGCTTCAGATGCATCACTTGAGAAGAGGATGAAGTTTGAGACACAAGACATCATGGAAGTGAGAGAGAGGTTGGGGCATTATGATTGCATCTTCTTGGCAGCACTTGTGGGTATGAACAGAGAAGAAAAAGTGAAGATCTTGGGACACATAAGGAAGTATATGAAGGAGGGTGGTTTTTTGCTGGTGAGAAGTGCAAAAGGGGCAAGAGCTTTCTTGTACCCTATAGTTGAGAAGAAGGACATGGTGAATTTTGAAGTGCTTACCATCTTTCATCCCACAAACGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAAACTTAG 855 0.4363 MASIKNSNSETQIPSELLIAQIMQLHACLSELESLKPSKQVNSLLSRLVKLCTLPSSIDIESLPQEGLIMRESLIDLCGRAEGLLELEFSTFIGHTPNPLNNLTLFPYYGNYVKLANMENKILKENGLENAKKVAFVGSGPMPLTSIIMATHHMDSIHLDNFDIDEKANEAARKLVASDASLEKRMKFETQDIMEVRERLGHYDCIFLAALVGMNREEKVKILGHIRKYMKEGGFLLVRSAKGARAFLYPIVEKKDMVNFEVLTIFHPTNDVINSVVLLRKPKT* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01605 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Rops7g01605 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 241 IPR029063 -
Rops7g01605 284 CDD AdoMet_MTases 162 238 - -
Rops7g01605 284 PANTHER NICOTIANAMINE SYNTHASE 3 11 282 IPR004298 GO:0030410|GO:0030418
Rops7g01605 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Rops7g01605 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01605 Rops-Chr7 24518669 24519523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01605 15 281 Nicotianamine Synthase Gene Family AT5G56080 50.554 7.95e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01605 K05953 - gmx:100819726 461.84