Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01602 ATGGCTAATTCCCAAAACTTTGACTTTGAAAACCAAATTCCTTCAGAGCTTCTGATAGCTCAGATCATGCAACTTCATGCAAGCATTTCTGAGCTTGAATCTCTTAAGCCTTCTAAGCAAGTCAATAGCCTGATGAGTCGCCTAGTGAAACTGTGCACCCTCCCTTCATCCATTGACATTGAGGCTTTGCCCCAAGAGGTTCAGATCATGCGTGAGAGCCTCATTGATATTTGTGGTCGTGCTGAAGGGCTTTTAGAGCTTGAGTTTTCAACTTTCATAGGCAACACACCCAATCCATTAAAGAATTTAACTCTCTTCCCATACTATGGGAACTATGTCAAACTAGCAAACTTGGAGAACAAAATCCTCAAAGAAAATGGTATGGTGAATGCAAAGAAGGTAGCTTTTGTAGGGTCTGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCGTCACATGGACTCAACCCACTTTGATAACTTTGATATTGATAAGAAGGCAAATGATGCAGCTCGTAAGCTTGTTGCTTCAGATGCAGCACTTGAGAAGAGGATGAAGTTTGAGACACATGACATTATGGAAGTGAAAGAGAGGTTGGGGCAATATGATTGCATCTTCTTGGCAGCACTTGTGGGTATGAACAAAGAAGAAAAAGTGAAGATCTTGGGACACATAAGGAAGTATATGAAGGAGGGTGGTTTTCTGCTAGTGAGAAGTGCAAAAGGGGCAAGAGCTTTCTTGTACCCCATAGTTGAGAAGGAGGACATGGTGAATTTTGAGGTGCTTACCATCTTTCATCCCACAAACGATGTGATCAACTCAGTTCTTCTTCTTCACAAACCTAAAGCTTAG 855 0.4211 MANSQNFDFENQIPSELLIAQIMQLHASISELESLKPSKQVNSLMSRLVKLCTLPSSIDIEALPQEVQIMRESLIDICGRAEGLLELEFSTFIGNTPNPLKNLTLFPYYGNYVKLANLENKILKENGMVNAKKVAFVGSGPMPLTSIIMATRHMDSTHFDNFDIDKKANDAARKLVASDAALEKRMKFETHDIMEVKERLGQYDCIFLAALVGMNKEEKVKILGHIRKYMKEGGFLLVRSAKGARAFLYPIVEKEDMVNFEVLTIFHPTNDVINSVLLLHKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01602 284 Pfam Nicotianamine synthase protein 12 282 IPR004298 GO:0030410|GO:0030418
Rops7g01602 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 240 IPR029063 -
Rops7g01602 284 CDD AdoMet_MTases 162 238 - -
Rops7g01602 284 Gene3D Vaccinia Virus protein VP39 16 282 IPR029063 -
Rops7g01602 284 PANTHER NICOTIANAMINE SYNTHASE 3 14 282 IPR004298 GO:0030410|GO:0030418
Rops7g01602 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01602 Rops-Chr7 24492667 24493521 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01602 17 281 Nicotianamine Synthase Gene Family AT5G56080 52.045 1.33e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01602 K05953 - gmx:100819726 461.455