Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01516 ATGGAGAATGAGAGCACAGAGTCGCGAAAGCAAGCGAGGCTTGCCATTTTGGAACTTGCGAACATGATAAGTGTCCCCATGTCCTTAAACGCCGTCGTGCGGCTTAACGTTGCTGACGCCATCTGGCAAGGCGGTTCCAACGCGCCCCTCACAGCCGCCCAGATACTCGCGCGTGTCCTTCCCGGCGGTGGCGGTGACGCCGAGAACCTTCAGCGCGTGCTACGCATGCTGTCCAGTTACGGCGTGTTCGAGGAGCACATCGACGGTGGCGAAAGGAAGTACTCACTAACGGACGTTGGGAAAACGCTCGTCACCGATGAACAAGGCCTATCCTACGCGCCTTACGTGCTCCAACACCACCAGGATGCGTTGATGCGAGCATGGCCATTGGTACACGAGGCAATTGTGGACCCTACGAAGGAGCCCTTCGAGAGGGCAAACGGAGAAGCAGCATATGGGTACTACTCGAAGCAACCAGAGATGAACGAGTTAATGGTGAAGGCCATGTCAGGAGTATCAGTGCCCTTCATGAGGGCCATGTTGGAGGGTTATGATGGCTTCCAAGGTGTGGAGAAACTGGTTGATGTAGGTGGCAGTGGTGGTGACTGTCTCCGAATGATCTTGCAAAAATACCCCACCATCAAAGAAGGGATCAACTTTGACCTCCCTGAAGTTGTGGCCAAAGCACCACAAATTCCAGGTGTGACCCATGTGGGTGGTGACATGTTCAAATTTGTACCTCAAGGTGATGCCATCTTCATGAAGTGGGTGCTAACAACATGGACAGATGAAGAATGCAAGCACATAATGCTCAACTGTTACAAGGCACTGCCAAAGGGAGGCAAACTAATTGCTTGTGAGCCAGTGCTACCAGAGCATTCGGATGAGAGTCACAGAACAAGGGCTTTGCTTGAGGGTGACATATTCGTGATGACAATATACAGAGCCAAGGGGAAGCACAGAACTGAAGAACAATTCAAGCAGATAGCCATTTCTGCAGGTTTCTTTCGTTTCAGATCCTTCCATGTCGACCATTTCCATACTGTCCTTGAGTTTCAGAAATGA 1065 0.5136 MENESTESRKQARLAILELANMISVPMSLNAVVRLNVADAIWQGGSNAPLTAAQILARVLPGGGGDAENLQRVLRMLSSYGVFEEHIDGGERKYSLTDVGKTLVTDEQGLSYAPYVLQHHQDALMRAWPLVHEAIVDPTKEPFERANGEAAYGYYSKQPEMNELMVKAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKYPTIKEGINFDLPEVVAKAPQIPGVTHVGGDMFKFVPQGDAIFMKWVLTTWTDEECKHIMLNCYKALPKGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQIAISAGFFRFRSFHVDHFHTVLEFQK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01516 354 PANTHER O-METHYLTRANSFERASE 19 338 IPR016461 GO:0008168
Rops7g01516 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Rops7g01516 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Rops7g01516 354 FunFam Caffeic acid 3-O-methyltransferase 109 354 - -
Rops7g01516 354 Pfam O-methyltransferase domain 132 335 IPR001077 GO:0008171
Rops7g01516 354 Gene3D - 1 108 IPR036388 -
Rops7g01516 354 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Rops7g01516 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Rops7g01516 354 Gene3D Vaccinia Virus protein VP39 109 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01516 Rops-Chr7 22373329 22377444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01516 1 354 Monolignol Biosynthesis Gene Families AT3G53140 75.766 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01516 - - gmx:100784957 645.966