Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01498 ATGCTAATGGGCGCGCGCTCTGCTTGGCTTGGGCGCGCACCTACAGCATCCAATAATGTTAAATTATCATTCACATTGGTTAACGTTGTTGTTTTGGTATTGATTTCATCATGTTCATGCAAAACGGATGCCGAGGCGCTGTTGAAGTTCAAGGATTCATTGAGGCATGCGGTAGCCCTTAGCAGTTGGGATCCATCCATAAACCCAAAGCCACCTTGCTCTGGAGATATTCCCAACTGGGTGGGCTTGTTTTGCACGAATAACAGGGTTTGGGGGTTGCGCCTTGAGAGCATGGGCCTAACTGGTGAAATCGACGTGGAATCTCTTTCTTTAATGCCCGGTCTGCGGACCCTTAGTCTAATGAACAATACCTTTGTGGGTCCCTTGCCAAACCTCAAGATGCTCCCAAATTTGAAGGCCCTCTACTTGTCCTTTAATCATTTCTCTGGACAGATACCTGACGATGCTTTTGAGGGTATTAATAGGTTGAGGAAAGTATATTTGGCTGATAACGAGTTCACGGGTCTAATTCCTTCCTCCCTTGCTACCATACCCAGTCTCCTCATCCTCAGGCTTGACGGAAACAAGTTTAAAGGTCAAATCCCAGATTTTCCTCACAAAAATTTGAAGATTATCAACCTCTCTAACAATGAGTTAGAAGGTCCAATCCCAGCCATTCTAAGCACCTTCCACGCCTCCTCCTTCAGCGGCAACACAGGTCTATGTGGGCCGCCCTTGATGAATCGGTGCCAAGTGGCAACCCAGCATGGGAGTCCAAGCGTTATGAAAATTTTACTTATCGTGATAAGTATAGCATTGATAGTGGCCATCGTGGTTGCAGCATTGATCATATGGCGCTTGAGGTCCCAGACCCAGAAGCAATCAGATGCCGCCTCAACGTTACAGGTGCAAGCCTCCAACAAATACGTTCCTCCCGTTTACGTGAAAACTAGAAGCCTTGCGGAACACTATGATAATAGTCCTAAGCATGTGTCAGATCACGGTCATAGACATTCCAAGAAGGGGGAACAAGGCAAGCTAACATTCCTCAGGCATGATGGACCCAAGTTTGATTTACAAGATTTGCTTAGGGCCTCCGCTGAAATTCTTGGCAGTGCCTCATTTGGGTCTTCCTACAAGGCCGTGATTTTGGACGGACAAGCCGTGGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCAGAGAGAAGAGTTTCATGAGCACATGAGAAGGCTAGGCAACCTCGACCATCCCAATATTCTGCCTCTCCTCGCCTATTATTATAGAAAAGAAGAGAAACTCTTGATCTCTTCTTTTGTTGACAATGGTTGCTTGGCCAGCCATCTTCATGGTAATCATAACTATCAAAAACCGAGCCTTGATTGGCCAACACGCTTGAAAATCGTCAAAGGGGTAGCCAGGGGTTTGGCCTACCTATACAATGCACTCCCAAGCTTGATTGTGCCTCATGGTCATCTCAAATCTTCCAACGTGCTTTTGGATAAATCCTTTGAGCCCCTACTCACTGATTATGGCCTCAGTCCTGTGATCAATCTTGACCACGCCCAACAAATCATCATGCCTTACAAATCTCCAGAGTATGCTCAACTTGGCCGCATCACAAAGAAAACTGACGTGTGGAGTTTTGGAATTCTGATATTGGAGATCTTGATGGGAAGATTCCCAGAGAACTATATCACACACAGGCATAACAGTGACTCTGACATAGCTAGTTGGGTGAATACGATGATTACAGAGAAGCGCACAAGTGAAGTGTTTGACATTGAGATGGGTGGAGTCGGAAATAGTAAAGCTGAATTGCTCAAACTCTTGAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGCTGGATATGAAGGAAGCTCTTGAGCAGATTGAAGACTTGAAAGAAGGCGAAAGCGATGGAGAATACTCTTCATCTCTCATCACCAACGAAAGGGATGCTTATAGAGCCGTGTGA 1989 0.4575 MLMGARSAWLGRAPTASNNVKLSFTLVNVVVLVLISSCSCKTDAEALLKFKDSLRHAVALSSWDPSINPKPPCSGDIPNWVGLFCTNNRVWGLRLESMGLTGEIDVESLSLMPGLRTLSLMNNTFVGPLPNLKMLPNLKALYLSFNHFSGQIPDDAFEGINRLRKVYLADNEFTGLIPSSLATIPSLLILRLDGNKFKGQIPDFPHKNLKIINLSNNELEGPIPAILSTFHASSFSGNTGLCGPPLMNRCQVATQHGSPSVMKILLIVISIALIVAIVVAALIIWRLRSQTQKQSDAASTLQVQASNKYVPPVYVKTRSLAEHYDNSPKHVSDHGHRHSKKGEQGKLTFLRHDGPKFDLQDLLRASAEILGSASFGSSYKAVILDGQAVVVKRYKQMNNVQREEFHEHMRRLGNLDHPNILPLLAYYYRKEEKLLISSFVDNGCLASHLHGNHNYQKPSLDWPTRLKIVKGVARGLAYLYNALPSLIVPHGHLKSSNVLLDKSFEPLLTDYGLSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILMGRFPENYITHRHNSDSDIASWVNTMITEKRTSEVFDIEMGGVGNSKAELLKLLKIGLSCCEENVERRLDMKEALEQIEDLKEGESDGEYSSSLITNERDAYRAV* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01498 662 FunFam pollen receptor-like kinase 1 333 439 - -
Rops7g01498 662 Gene3D Transferase(Phosphotransferase) domain 1 440 648 - -
Rops7g01498 662 Pfam Protein tyrosine and serine/threonine kinase 368 633 IPR001245 GO:0004672|GO:0006468
Rops7g01498 662 Pfam Leucine rich repeat N-terminal domain 41 85 IPR013210 -
Rops7g01498 662 Gene3D Phosphorylase Kinase; domain 1 330 439 - -
Rops7g01498 662 FunFam Pollen receptor-like kinase 1 440 649 - -
Rops7g01498 662 Pfam Leucine Rich Repeat 208 228 IPR001611 GO:0005515
Rops7g01498 662 Pfam Leucine rich repeat 136 197 IPR001611 GO:0005515
Rops7g01498 662 ProSiteProfiles Protein kinase domain profile. 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01498 662 Gene3D Ribonuclease Inhibitor 40 205 IPR032675 -
Rops7g01498 662 SUPERFAMILY Protein kinase-like (PK-like) 368 636 IPR011009 -
Rops7g01498 662 SUPERFAMILY L domain-like 70 230 - -
Rops7g01498 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 31 640 IPR046959 -
Rops7g01498 662 Gene3D Ribonuclease Inhibitor 206 253 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01498 Rops-Chr7 22115919 22118669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01498 14 658 Receptor kinase-like Gene Family AT5G35390 48.204 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops7g01498 PK_Tyr_Ser-Thr 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01498 - - aprc:113854862 978.008