Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01495 ATGGTTGGATTCCAGAGTGACCATATGCCTGGGAACAAGTACAATGGTAATCATAATATTTATCCGGGTCGTGTTGAACGACTTGTGAGAGGAAGAGAACTAAGAAAAAGCAGCAGGGCATCACTTTCGAACGAGTCTCCTGATATTAATAATAATAATAATAATAATAATTATAATAATAATCACGTGGTTCCTGAATCTTTTGAACATGACCTGCGCTTAAGAGAAGATAATAATAACTCTAGTGCTTCCTATGTTGAACGATTCCTGGAAGGGGCAGCAGCAGCAAGGGCTCTTAGTGAGGGATGCGAAAGGGAAGATGGGAAGCCTTTCAGACAACGGCTCTTGGTGGTGGCAAATAGGCTGCCCGTCTCTGCAGTTAGGAGAGGTGATTCGTGGTCATTGGACATAAGTGCTGGTGGCCTGGTGAGCGCTCTTTTAGGTGTAAAGGAGTTTGAGGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGCCAGATGAGATTGGACAGAAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGTATCCCAGTATTTCTCGATGAAGAGATTGTTCATCAATACTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACACGGAGTTTCCAGTCTCAGTTTGCAGCATATCAGAAAGCAAATCAAATGTTTGCTGATGTTGTAAATAAGCACTATGAAGAAGGAGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAGAAGTATAACAGCAAAATGAAAGTTGGATGGTTTCTCCATACTCCATTTCCATCTTCTGAAATTCACAGGACACTACCATCTCGTTCAGAGCTCCTGCATGCTGTTCTTGCTGCTGATTTGGTTGGTTTTCACACCTATGATTATGCACGACATTTTGTTAGTGCATGTACTCGCATTCTTGGACTTGAGGGAACGCCTGAAGGGGTTGAGGATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGAACGATTCATACGTGCACTTGACCTTCCTCAAGTTCAGGATCACATCAAAGAATTACAAGAAAGATTCAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAAGGCTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACGAGAACAGATGTTCCTGAGTATCAAAAGCTTACTAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTGTCTGCTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCATGCATTATGTGCTCTGTATGCTGTTACTGATGTAGCACTTGTAACTTCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCACAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGATGTTGCTACTGCAATTGACAAGGCTCTGAATATGCAATCTGCAGAAAGAGAAAAGAGACATAGGCATAACTTCCATCATGTAAAAACCCACACCGCACAGGAATGGGCAGAAACTTTTGTAAGCGAACTAAATGATACTGTTGTTGAGGCACAGCTAAGAACAAAACAAGTTCCACCACGGCTCCCAACCAAGACTGCAATTGAACGTTATCTGCAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTATAACTGAACCAGTTGAGAGAAAAGGTGATCAGTATAAAGAAATGGAACTCATAGTGCATCCAGAACTGAAACGACCCTTGACAGAACTTTGCAGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGAACCGTTCTAGATGAAAACTTTAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAGGGAGACTGGATGACAACAATGCCAGAACAACTAAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACGGAAAGAACGCCTCGGTCACATTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAGTTGAAGTTGTACAAGGCAGCCGATCTGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTTGGGGAGATAGTCCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGCGAAGCAGGATGAAGATATATATGCATTTTTTGAGCCAGAGCTTCCTTCTATTGGTGTGGGTCTTCAACGAAGTAAGGTAACGGATGGAGTTAAGTTTCCTGTTGAGAGGATATCATCATTGAAGATCCCAGCAAGTAAAAACGGACCAAAGTCATCTCAAAATAAGGGACAACGACCTGTGTCAAATTCTGAGAAGAAAACAACTAATCATGTATGCCGTGCACCACGGCGGCCACCTCCTGAAAAGATCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTGCTGTTGGACGAACTCAAACAAATGCCCGGTATACGCTTGGATCATCTGATGACGTTGTTGCATTTCTCAAGGAACTAGCGTATGCATCTTCAAACTCTTGTTAA 2847 0.4268 MVGFQSDHMPGNKYNGNHNIYPGRVERLVRGRELRKSSRASLSNESPDINNNNNNNNYNNNHVVPESFEHDLRLREDNNNSSASYVERFLEGAAAARALSEGCEREDGKPFRQRLLVVANRLPVSAVRRGDSWSLDISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALDLPQVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEEKADWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLSAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITDVATAIDKALNMQSAEREKRHRHNFHHVKTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTKTAIERYLQSTNRLLILGFNGTITEPVERKGDQYKEMELIVHPELKRPLTELCSDPKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLNPSKGDWMTTMPEQLNMEWVDSVKHVFEYFTERTPRSHFEEREASLVWNYRHADVEFGRLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKQDEDIYAFFEPELPSIGVGLQRSKVTDGVKFPVERISSLKIPASKNGPKSSQNKGQRPVSNSEKKTTNHVCRAPRRPPPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVAFLKELAYASSNSC* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01495 948 MobiDBLite consensus disorder prediction 40 63 - -
Rops7g01495 948 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 581 - -
Rops7g01495 948 Gene3D - 614 840 IPR023214 -
Rops7g01495 948 MobiDBLite consensus disorder prediction 34 63 - -
Rops7g01495 948 CDD GT20_TPS 114 578 IPR001830 GO:0003824|GO:0005992
Rops7g01495 948 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g01495 948 Gene3D Glycogen Phosphorylase B; 106 359 - -
Rops7g01495 948 Pfam Glycosyltransferase family 20 114 578 IPR001830 GO:0003824|GO:0005992
Rops7g01495 948 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 700 780 - -
Rops7g01495 948 SUPERFAMILY HAD-like 610 941 IPR036412 -
Rops7g01495 948 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 360 563 - -
Rops7g01495 948 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 106 942 IPR001830 GO:0003824|GO:0005992
Rops7g01495 948 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 114 578 IPR012766 GO:0003825|GO:0005992
Rops7g01495 948 Pfam Trehalose-phosphatase 616 845 IPR003337 GO:0003824|GO:0005992
Rops7g01495 948 Gene3D Glycogen Phosphorylase B; 360 563 - -
Rops7g01495 948 MobiDBLite consensus disorder prediction 858 895 - -
Rops7g01495 948 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 106 359 - -
Rops7g01495 948 CDD HAD_TPP 611 836 - -
Rops7g01495 948 Gene3D - 700 780 - -
Rops7g01495 948 NCBIfam trehalose-phosphatase 609 826 IPR003337 GO:0003824|GO:0005992
Rops7g01495 948 MobiDBLite consensus disorder prediction 860 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01495 Rops-Chr7 22069444 22093585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01495 9 946 Trehalose Biosynthesis Gene Families AT1G78580 76.141 0.0 1481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01495 K16055 - gmx:100789554 1644.4