Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01488 ATGAGAGCCCAAGAGGCTCGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGTTGATGAATACATAATCATTGGATCTGCCAACATTAACCAGAGATCAATGGATGGTGCTAGAGACACTGAGATTGCAATGGGTGCTTATCAACCCTATCATTTGGCTACAAGGCAGCCAGCAAGGGGCCACTTGCTACGCTATCCTGTTGGGATTTCCAGCAAAGGAAAAGTCACGGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGAAAAAGATGACTTTATTCCACCAATCCTTACTACTTAG 327 0.4526 MRAQEARRFMIYVHAKMMIVVDEYIIIGSANINQRSMDGARDTEIAMGAYQPYHLATRQPARGHLLRYPVGISSKGKVTELPGFEFFPDTKARVLGEKDDFIPPILTT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01488 108 Gene3D Endonuclease Chain A 2 57 - -
Rops7g01488 108 PANTHER PHOSPHOLIPASE D 3 55 IPR015679 -
Rops7g01488 108 SMART pld_4 9 36 IPR001736 GO:0003824
Rops7g01488 108 Pfam PLD-like domain 12 45 IPR025202 -
Rops7g01488 108 SUPERFAMILY Phospholipase D/nuclease 6 52 - -
Rops7g01488 108 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 9 36 IPR001736 GO:0003824
Rops7g01488 108 Pfam Phospholipase D C terminal 44 98 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01488 Rops-Chr7 21961833 21962549 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01488 1 108 Phospholipase D Gene Family (Wang group) AT3G15730 50.920 1.71e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01488 K01115 - aew:130788323 150.984