Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01474 ATGGATGGTGCTAGAGACACTGATATTGCAATGGGTGCTTATCAACCCTACCATTTGGCTACAAGGCAGCCAGCAAGGGGTCAGATCCATGGTTTCCGCATGTCATTGTGGTATGAACACCTTGGCATGCTTAATGACTCTTTCCTCCTCCCTGAAAGTGAAGAATGTATTAAGAAGGTGAACCAGATTGCTGACAAGTACTGGGATCTCTATTCTCAAGAATCACTTGAGCATGACCTTCCAGGCCACTTGCTACGCTATCTTGTTGGGATTTCCAGCCAAGGAAAAGTCACGGAGCTACCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGAAAAAGATGACTTTATTCCACCAATCCTTACTACTTAG 384 0.4557 MDGARDTDIAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLNDSFLLPESEECIKKVNQIADKYWDLYSQESLEHDLPGHLLRYLVGISSQGKVTELPGFEFFPDTKARVLGEKDDFIPPILTT* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01474 127 Pfam Phospholipase D C terminal 46 117 IPR024632 -
Rops7g01474 127 PANTHER PHOSPHOLIPASE D 1 116 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01474 Rops-Chr7 21370139 21370522 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01474 1 127 Phospholipase D Gene Family (Wang group) AT1G52570 79.528 8.05e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01474 K01115 - gmx:100794849 239.965