Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01471 ATGGCTACTCATGATCAAGAAATCGAGGAGTACTTCCATGGCAGTGAAGTGCATTGTGTTTTATGCCCTCGAAATCCTGATGATGGTGGAAGTGTTATTCAGGACATAGAAATTGCCACCATGTTTACTCATCACCAGAAAATTGTGGTGGTGGACAGTGAGTTGCCAAGTGGAGGGTCATATAAGAGAATAATTGTGAGTTTTGTAGGGGGTATTGATCTCTGTGATGGAAGATATGATACTCAATTCCATTCACTTTTCAGAACCCTGGATATAGCCTATCATGATAATTTTCATCAGATTAACTTTCCTGGTGCTTCAATTAAAAAAGGTGGTCCAAGGGAACCTTGGCATGACATCCACTCTAGGTTTGAAGGGCCCGTTGTTGGGATGTTTGGTTTAACTTTGAGCAGAGATGGAGGAAGCAGGGTAAAAAAGACTTGCTTGTTCCACTGA 456 0.4167 MATHDQEIEEYFHGSEVHCVLCPRNPDDGGSVIQDIEIATMFTHHQKIVVVDSELPSGGSYKRIIVSFVGGIDLCDGRYDTQFHSLFRTLDIAYHDNFHQINFPGASIKKGGPREPWHDIHSRFEGPVVGMFGLTLSRDGGSRVKKTCLFH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01471 151 Gene3D Endonuclease Chain A 14 139 - -
Rops7g01471 151 PANTHER PHOSPHOLIPASE D 1 129 IPR015679 -
Rops7g01471 151 Pfam Phospholipase D Active site motif 40 78 IPR001736 GO:0003824
Rops7g01471 151 SUPERFAMILY Phospholipase D/nuclease 5 137 - -
Rops7g01471 151 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 40 78 IPR001736 GO:0003824
Rops7g01471 151 SMART pld_4 40 78 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01471 Rops-Chr7 21362509 21362964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01471 1 144 Phospholipase D Gene Family (Wang group) AT1G52570 69.595 1.17e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01471 K01115 - jre:109013124 240.35