Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01469 ATGGTGCAATCAAAGAAGTTCAGAGGAGTCAGGCAACGCCATTGGGGCTCTTGGGTTTCTAAGATTCGTCACCCCTTATTGTATTTACATCAAACCAACTCATCCTTTTGTTTTATTGTTTCTTTATCTTCTGCAGATACTTTAGAAAAGTATTGGAAAAGGAGGGTGTGGCTCGGAACATTTGATACTGCTGAAGAAGCAGCTAGAGCATATGATGAGGCAGCTATTTTGATGAATGGAAGAAACGTCAAAACTAACCTTCCAGTTACAGATAATCAAATGGGAAATCATAATTCTACTTCATTCTTTTCCACAACATTTTCTGCAGTTCTCAGTGAAAAGTTGAGGAAGTGTTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTAAGGCTTGACACACAGAATTCCCACTTCGGGGTATGGCAGAAGCGAGCAGGGCCTTGTTCCGAATCAAACTGGATTATGATGGTTGAATAA 477 0.413 MVQSKKFRGVRQRHWGSWVSKIRHPLLYLHQTNSSFCFIVSLSSADTLEKYWKRRVWLGTFDTAEEAARAYDEAAILMNGRNVKTNLPVTDNQMGNHNSTSFFSTTFSAVLSEKLRKCCKSPSPSLTCLRLDTQNSHFGVWQKRAGPCSESNWIMMVE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01469 158 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 144 - -
Rops7g01469 158 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Rops7g01469 158 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Rops7g01469 158 Gene3D AP2/ERF domain 5 90 IPR036955 GO:0003700|GO:0006355
Rops7g01469 158 CDD AP2 5 90 IPR001471 GO:0003700|GO:0006355
Rops7g01469 158 SUPERFAMILY DNA-binding domain 51 89 IPR016177 GO:0003677
Rops7g01469 158 ProSiteProfiles AP2/ERF domain profile. 6 88 IPR001471 GO:0003700|GO:0006355
Rops7g01469 158 SMART rav1_2 6 94 IPR001471 GO:0003700|GO:0006355
Rops7g01469 158 Pfam AP2 domain 6 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01469 Rops-Chr7 21337704 21338370 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01469 1 158 AP2-EREBP Transcription Factor Family AT1G15360 57.059 6.99e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops7g01469 AP2 3.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01469 - - gmx:100796962 207.223