Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01467 ATGCCAAAGCCGTCGTGGCCGAGGCGGAGGGAGAAGGAGTCGGTGGCGCGACGGAGGAGGGTTGTTCTCAAGTCACAAAATCTTTCTGGCACACTCCCAAGGGAACTGGTGAAGTTGCCTTACCTCCAAGAAATTGACCTCACACGCAACTACCTCAATGGTACAATCCCTCCACAATGGGGTACCATGAATCTTGTCAACATTTCCCTTTATGGAAACCGACTAACGGGTCCAATCCCAAAAGAACTAGGAAACATCACCACCTTGAAAAGTTTGATCCTGGAGTTCAATCAATTATCTGGAAGGCTTCCTCCGGAGCTTGGGAATCTTCCCCAGCTTGAAAGACTGTTTCTTACCTCCAACTATTTTACTGGAAATTTACCTGCAACATTTGCTAGGCTCACTACATTGAAACATGTTCGACTTGGTGATAATCAATTCTCTGGAACTATACCCAATTTCATTCAGAGTTGGACAAGTCTTGAGAGGCTGGTGATGCAAGGGAGTGGTTTGAGCAGCCCAATTCCTTCTGGAATTTCGTTTCTAAAAAACCTCACTGACTTGAGAATTAGTGACTTGAAAGGTCTAGATTCTCATTTTCCGCAACTTAGTAACTTGAGAAATTTGGAAACACTGGTGCTGAGGAGTTGCAATCTTATAGGAACGGTTCCTGATTATCTTGGAAATATGACTAATTTAAGATCATTGAACTTGTTTGCATCATCTTCGGAAGGAAATAACTCGGGAATGGTTCCATGTTTGGGAATCGATGGCTGTCCTAAAACTTGGTACTCTCTCCACATAAATTGTGGTGGGAAGCTCATACCTTCTAATGGAAGCATGACATATGATGATGATTCACATGAAGCTGGACCTGCAACATTTTACCGCAGTGGATCAAACTGGGCATTTAGCAACACTGGTCACTTCTTTGATAGTAGCAAGATAGACTATTATACCTGGTCTAATTCAACTAAGCTGGCTATGGACAATGCTGAACTGTATATGAATGCACGTGTTTCTCCCCTTTCTCTCACATATTATGGATTTTGCCTAGGAAATGGAAACTACACAGTAAACCTCCATTTTGCAGAGATAATGTTCACTGATGATCAAACATATTACAGCCTCGGGAGGCGTGTGTTTGACATCTATATTCAGGCAGTCATAAAAAATTTCACTGCCATTGTGACTAGTAATACCTTGGAGATCCGCTTGCATTGGGCTGGAAAAGGGACAACTGGTATCCCATTTGGATCAGTACATGGTCCTCTTATATCAGCTATATCAGTTGATCCTGACTTTACACCCCCAGAGGAAAAGGGAAGTAGCACCCCTGTGTGGCCTATTGTTGCAGGTGTAGTTGCTGGAGTACTTGTTATCATCATGGTATTTGGCATAGCTTGGTGGAGAGGATGTCTAGGACACAAAGGTTCATTAGAAAGAGAGCTAAGGGGTTTAGATCTGCAAACTGGCTTATTTACCTTACGGCAAATCAGAACAGCAACTAACAACTTTGATATTGCCTTCAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTCAGATGGCACAGTCATTGCAGTTAAGCAGCTTTCTTCTAAATCAAATCAAGGGAATCGTGAGTTTATAAATGAGATTGGCACAATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAATTGTTGCTGATATATGAATACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGCCCGAGAAAAAGGTCAATTGAAGTTGGATTGGTCAACAAGGCAAAGGATTTGCGTTGGTATTGCTAGAGGGTTGGCTTACCTCCATGAAGAGTCGAGGCTAAAGATAGTTCACAGGGATATTAAGGCCACTAATGTGTTACTGGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAGCTCAAAGATGATGGCCATACCCACATAACCACCAGAATAGCTGGCACATATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGAGAAAGCGGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATTGTTAGTGGGAAGAACAACACCATGAGCTGGTCAAAGGAAGAATGCTTCTCTCTTGTTGATTGGGCACGTCTCTTGAAAGAAGGAGGCAATCTAATGGACCTAGTTGATGAGAGGTTGGGTAAACACTTCAATAAAGAGGAAGCAATGGTCATGATCAATGTGGCTCTTTTATGCACCCAGGTTTCTCCAAATCACCGACCCACCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTTGTTCAAGAGGTGATGCCAGACAAAGATCAGGTATTCAATGGCAAGAACTTGGAGATGATCCAACAGTATTATCAGAAGAGAGAAAAAAATAAGTCCTCTGAGATTCAAGAAGAGAGCATCTCAATAGATGAAACTGCTGCATTTGTGTCTGATACAGATCTGCATTCTTTCAGCGTTGATTCTTCTTACTGA 2538 0.4224 MPKPSWPRRREKESVARRRRVVLKSQNLSGTLPRELVKLPYLQEIDLTRNYLNGTIPPQWGTMNLVNISLYGNRLTGPIPKELGNITTLKSLILEFNQLSGRLPPELGNLPQLERLFLTSNYFTGNLPATFARLTTLKHVRLGDNQFSGTIPNFIQSWTSLERLVMQGSGLSSPIPSGISFLKNLTDLRISDLKGLDSHFPQLSNLRNLETLVLRSCNLIGTVPDYLGNMTNLRSLNLFASSSEGNNSGMVPCLGIDGCPKTWYSLHINCGGKLIPSNGSMTYDDDSHEAGPATFYRSGSNWAFSNTGHFFDSSKIDYYTWSNSTKLAMDNAELYMNARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYYSLGRRVFDIYIQAVIKNFTAIVTSNTLEIRLHWAGKGTTGIPFGSVHGPLISAISVDPDFTPPEEKGSSTPVWPIVAGVVAGVLVIIMVFGIAWWRGCLGHKGSLERELRGLDLQTGLFTLRQIRTATNNFDIAFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSNQGNREFINEIGTISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFAREKGQLKLDWSTRQRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDDGHTHITTRIAGTYGYMAPEYAMHGYLTEKADVYSFGVVALEIVSGKNNTMSWSKEECFSLVDWARLLKEGGNLMDLVDERLGKHFNKEEAMVMINVALLCTQVSPNHRPTMSSVVSMLEGKTVVQEVMPDKDQVFNGKNLEMIQQYYQKREKNKSSEIQEESISIDETAAFVSDTDLHSFSVDSSY* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01467 845 Gene3D Ribonuclease Inhibitor 5 125 IPR032675 -
Rops7g01467 845 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 127 194 - -
Rops7g01467 845 CDD STKc_IRAK 512 779 - -
Rops7g01467 845 SUPERFAMILY Protein kinase-like (PK-like) 490 787 IPR011009 -
Rops7g01467 845 Gene3D - 263 433 - -
Rops7g01467 845 Pfam Protein tyrosine and serine/threonine kinase 511 777 IPR001245 GO:0004672|GO:0006468
Rops7g01467 845 Gene3D Transferase(Phosphotransferase) domain 1 582 794 - -
Rops7g01467 845 Gene3D Ribonuclease Inhibitor 126 196 IPR032675 -
Rops7g01467 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 809 - -
Rops7g01467 845 SUPERFAMILY L domain-like 19 240 - -
Rops7g01467 845 Pfam Malectin domain 265 393 IPR021720 -
Rops7g01467 845 Gene3D Ribonuclease Inhibitor 197 262 IPR032675 -
Rops7g01467 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Rops7g01467 845 ProSiteProfiles Protein kinase domain profile. 506 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01467 845 SMART serkin_6 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01467 845 Gene3D Phosphorylase Kinase; domain 1 478 581 - -
Rops7g01467 845 FunFam Putative LRR receptor-like serine/threonine-protein kinase 582 789 - -
Rops7g01467 845 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 475 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01467 Rops-Chr7 21255390 21265618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01467 23 807 Receptor kinase-like Gene Family AT1G53420 53.534 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01467 PK_Tyr_Ser-Thr 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01467 - - psat:127081874 1057.36