Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01465 ATGGCATCAGAGATGATCAAAGGCAAACGTTATGGGAGAAAGGCTGATGTGTACAGTTTTGGGCTTATTCTGTGGGAGATGGTGAGTGGAAAAGTGCCATTTGAGGACTTGACTCCAACCCAGGTTGCTTTTGCAGTGGCACATAAAAATTCTAGGCCTGTTATTCCTTCAAACTGCCCAATTGTTATTCCTTCTAGTCCTGCATCCAATTTAGTGCTCTCTGATGAGTAA 231 0.4329 MASEMIKGKRYGRKADVYSFGLILWEMVSGKVPFEDLTPTQVAFAVAHKNSRPVIPSNCPIVIPSSPASNLVLSDE* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01465 76 ProSiteProfiles Protein kinase domain profile. 1 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01465 76 SUPERFAMILY Protein kinase-like (PK-like) 1 61 IPR011009 -
Rops7g01465 76 Pfam Protein tyrosine and serine/threonine kinase 1 61 IPR001245 GO:0004672|GO:0006468
Rops7g01465 76 Gene3D Transferase(Phosphotransferase) domain 1 1 74 - -
Rops7g01465 76 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01465 Rops-Chr7 21250937 21251276 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01465 1 63 MAP Kinase Kinase Kinase AT5G58950 66.667 8.68e-27 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops7g01465 PK_Tyr_Ser-Thr 8.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01465 - - gmx:100782673 104.375