Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01464 ATGCCAATTAGCATGAAGATGATCACATCCTCTCAGTTTCTCCTCCTTTCACTCCTTTCCATTTGGTTCACTTGGCTTGCTTTTGGAGCCACCACTCTGCCACCCCATGAAGTGCAAGCGCTGAAAGATATAGGTAAAACACTTGGTAAGACGAATTGGGACTTCAATATGAATCCATGCAACTGGACAACAACACGTGTGAATAAAGTCCAATGCAATTGCTCCATACCCAATGACACCTTCTGCCATGTTGTTAAAATAGTTCTGAAATTACAAAATCTTCAAGGCAATCTCCCACCGGAACTGATCAAGTTGCCTTACCTCCAAGAAATTGACCTTACCCGTAACTACCTCAGTGGTACAATTCCTAGAGAATGGGGCTCCTCCAGTCTTGTAGAAATTTCTCTACTTGGGAACCGACTAACTGGTCCAATCCCAACAGAGCTGGGAAACCTCACCAATCTCAAACGTTTGATCCTTGAGTTTAATCAGTTCTCTGGAAATCTTCCTCCGGAACTTGGGAACCTTGTCCACATGGAACAATTGCATCTAAGCTCCAACAACTTTACTGGAAAATTGCCTGAAACTCTTGCAAGGCTTACTACAATCAAGGAATTCCGAATCAGTGACAATCAATTCTCTGGAAACATACCTGATTTTATTCAAAGATGGACAAGTCTTAATCAACTAGTAATTCAAGGGAGTGGTTTAAGTGGACCAATTCCTTCTGGAATTTCATTTCTGCAAAACTTAACTGACTTGAGGATTAGTGATTTGAATGGCCCTGATTCTTCTTTTCCACTAGTTGATAATATGACTGGACTGGAAACATTGATATTAAGGAGTTGCAATATTAATGACACACTTCTTCAATATTTTGCAAACTTGATAAATTTGACAGTCCTAGACCTCAGCTTTAACAAATTAAGAGGAGAGATTCCAACAAAGCTTGAAGGGTTAGTAAGAGCAACCTACATATATTTAACAGGAAACTTTCTCACTGGACCAGTGCCCGAGTGGACAAATAATAGAAACTTAGATCTTTCATATAACAATTTCAGTGTTGAAAACCCAGAGACAGAGACATGTTACCAGCAAAATGTGAACTTGTTTGCAAGCTTCTCAAGGGATAACTTAGGACCAGTTTCTTGTAAGAGCAGCACTAGATTCTGTACTAAAACCGTTAAATCTCTACATATAAATTGTGGTGGAAATCAGACTATCATTGGAGGTATAACATATGATGAAGATATAGATCCAGCAGGACCAGCAGTATATAGACAGAGTAGTGACAACTGGGCATTTAGCAATACCGGTCACTTCTTGGATAATAATACCATAACAAAGCTGCTCCCGTATACCACAGAGAATGAAACTAGGCTATATATGACAGATATTGAATTATATAAGAATGCACGTATTTCCCCCTTGTCTTTGACTTATTATGGATTTTGCTTGGAAAATGGAGACTACACAGTAAAGCTCCATTTTGCTGAGATAATGTTCACTGATGATGACACATATAGCAGCCTAGGAAGGCGTCTATTTGATGTCTACATTCAGGGAAAGCAGGTACTGAAGGATTTCAATATTGCAAACGACACACAAGGAGTTGGCAAGGAACTTATAAAACAATTTCCTGCTCATGTGAGTAGTAATGATTTAGAGATCCGCTTCTATTGGGCTGGCAGAGGGACAACATATATCCCATATAAATCAGTAAATGGTCCACTTATATCAGCTATATCTGTCACGTATGACTCTACAGGTGGCATATCTGCAGCGACAATTGTTGCAATTGTGGCTGCAGCAGTGATTTTTGTCATCTTGATTGTTGTTGGCATACGTTGGAGGGGAGGTTGTCTAGGAAAGAAGCATTTATTAGTAAGAGAGCTAAAAGATTTAGATCTGCCAGCTCGGTTATTTACCTTGCATCAAATCAAAGCAGCAACAAATAACTTTGATATTTCTAATAAGATTGGAGAAGGAAGCTTTGGTCCTGTTTATAAGGGCATTCTGTCAAATGGCACAGTAATTGCAGTGAAACAGCTTTCACCTAAATCTGAGCAAGGAAACCGTGAGTTCATAAATGAGATAGGCATGATCTCAGCTTTGCAACACCCTTATCTTGTTAAACTTTATGGCTGTTGTGTTGAGGGAGATCAGTTGTTGGTGGTATATGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTCGGCCCAGAAGAATGCCATTTAAAATTGAATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCCAGAGGTTTAGCTTTCTTGCATGAAGAATCAAGACTTAAAGTTGTTCACAGGGACGTAAAGGCTGCTAATGTGTTGCTTGACAAAGACCTGAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTCGATGAGGAGGACAATACTCACATAAGCACGAGAATAGCTGGGACATATGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTAACTGATAAAGCAGATGTCTATAGTTTCGGAATTGTTGCATTGGAAATTGTAAGTGGAAAGAGGAACATTATTCACCGGTCAAAGGAAGAAGCATTCTTTCTTCTTGATTGGGCACATCTGTTGAAAGAGAGAGGTAACCTACTAGAGCTAGTTGATCCAAGGTTGGGTTCAGATTTCAATGAAGAGGAGGCAATGGTGATGGTCAAAGTGGCCCTTCTATGCACCAATGCCACTTCAAACCTTAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAGGGCACAACAGTGGTTCCTGAATTTGTTTCACATCCAAGTGAGGTAATGGATGAGATGAGGTTGGAGACAATGAGACGGTTTTACAGTCAGGTAGATGGAAATAAAATAAGTGAGGCAAGAAGTCTGAGCTTGACAATTGATGTGCCATGGACTGCTTCATCTTCATCAACTGCAGACATCAATCCTGTCCACCTTGATGATTCCTATTTGGAGGAAAAGAAATTAAGAGAATCTGTATAA 3018 0.3989 MPISMKMITSSQFLLLSLLSIWFTWLAFGATTLPPHEVQALKDIGKTLGKTNWDFNMNPCNWTTTRVNKVQCNCSIPNDTFCHVVKIVLKLQNLQGNLPPELIKLPYLQEIDLTRNYLSGTIPREWGSSSLVEISLLGNRLTGPIPTELGNLTNLKRLILEFNQFSGNLPPELGNLVHMEQLHLSSNNFTGKLPETLARLTTIKEFRISDNQFSGNIPDFIQRWTSLNQLVIQGSGLSGPIPSGISFLQNLTDLRISDLNGPDSSFPLVDNMTGLETLILRSCNINDTLLQYFANLINLTVLDLSFNKLRGEIPTKLEGLVRATYIYLTGNFLTGPVPEWTNNRNLDLSYNNFSVENPETETCYQQNVNLFASFSRDNLGPVSCKSSTRFCTKTVKSLHINCGGNQTIIGGITYDEDIDPAGPAVYRQSSDNWAFSNTGHFLDNNTITKLLPYTTENETRLYMTDIELYKNARISPLSLTYYGFCLENGDYTVKLHFAEIMFTDDDTYSSLGRRLFDVYIQGKQVLKDFNIANDTQGVGKELIKQFPAHVSSNDLEIRFYWAGRGTTYIPYKSVNGPLISAISVTYDSTGGISAATIVAIVAAAVIFVILIVVGIRWRGGCLGKKHLLVRELKDLDLPARLFTLHQIKAATNNFDISNKIGEGSFGPVYKGILSNGTVIAVKQLSPKSEQGNREFINEIGMISALQHPYLVKLYGCCVEGDQLLVVYEYMENNSLAHALFGPEECHLKLNWPTRQKICVGIARGLAFLHEESRLKVVHRDVKAANVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKRNIIHRSKEEAFFLLDWAHLLKERGNLLELVDPRLGSDFNEEEAMVMVKVALLCTNATSNLRPSMSSVLSMLEGTTVVPEFVSHPSEVMDEMRLETMRRFYSQVDGNKISEARSLSLTIDVPWTASSSSTADINPVHLDDSYLEEKKLRESV* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01464 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 956 - -
Rops7g01464 1005 SUPERFAMILY Protein kinase-like (PK-like) 637 949 IPR011009 -
Rops7g01464 1005 CDD STKc_IRAK 660 927 - -
Rops7g01464 1005 SUPERFAMILY L domain-like 53 365 - -
Rops7g01464 1005 Pfam Leucine rich repeat 274 331 IPR001611 GO:0005515
Rops7g01464 1005 Gene3D Ribonuclease Inhibitor 187 261 IPR032675 -
Rops7g01464 1005 Gene3D Ribonuclease Inhibitor 36 186 IPR032675 -
Rops7g01464 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 730 937 - -
Rops7g01464 1005 Gene3D - 396 588 - -
Rops7g01464 1005 Pfam Malectin domain 397 582 IPR021720 -
Rops7g01464 1005 SMART serkin_6 654 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01464 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Rops7g01464 1005 ProSiteProfiles Protein kinase domain profile. 654 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01464 1005 Gene3D Transferase(Phosphotransferase) domain 1 730 935 - -
Rops7g01464 1005 Pfam Protein tyrosine and serine/threonine kinase 656 921 IPR001245 GO:0004672|GO:0006468
Rops7g01464 1005 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 39 193 - -
Rops7g01464 1005 Gene3D Ribonuclease Inhibitor 262 379 IPR032675 -
Rops7g01464 1005 Gene3D Phosphorylase Kinase; domain 1 624 729 - -
Rops7g01464 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 395 587 - -
Rops7g01464 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 623 729 - -
Rops7g01464 1005 FunFam Leucine-rich repeat transmembrane protein kinase 196 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01464 Rops-Chr7 21236236 21250775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01464 30 985 Receptor kinase-like Gene Family AT1G53420 54.649 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01464 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01464 - - gmx:100791136 1520.37