Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01460 ATGATTACTACCTCTCGATTTCTCTTCCTTTCACTCCTTGCATTTTGCTTCACATCACTTGGTTCAAGAGACGCTTCTCAGCTGCCAGAGTATGAAGTGCAAGCTCTGAAAGACATAGCCAAAACACTTGGTAAGAAGGATTGGGACTTCAGTACAAATCCATGCAGTGGACAACCAAACTGGACTACACCTGATTCCTCAAATGGAGTAACAAATACTGTTTCCTGTAATTGCTCTGTCCCCAATGACAACTTCTGCCATGTTGTTACCATAATCCTGAGAGGACAAAATCTTCAAGGCAGACTCCCACCGGAACTGATCAGGCTGCCATACCTCCGATATATTTACTTTGACCTCAACTACCTTAGTGGTACGATTCCTAAAGAATGGGGCTCCATGAATCTTGTGAACATTGCCCTTACTGGAAATCGATTAACGGGTTTAGTACCAGCAGAGATAGGAAATATATCAACTCTCCAAATGTTGGGCCTCGGGAACAATAATTTGTCTGGAAATCTTCCTCCAGAACTTGGGAATCTTACACGCCTTGAATATCTGTCACTTTACTCCAACAATTTTACTGGAGAGTTGCCCAAAACCTTTTCGAGGCTTACAACATTGGAAACTGTCTATCTTAGTGACAATCAATTCTCTGGAAGCATTCCCAATTTTATTCAAAGATGGACAAATCTTCAAATACTAGAGATTCAGGGGAGCGGTTTTAGTGGACCAATTCCGAAAGGAATTTCATTTCTACAAAACTTAACCTCTTTGGTAATTAGCGACTTGAATGGACCTGATTCTACTTTTCCACCACTTAAGAATATGAAATCATTGGACACATTGATACTAAGGAGTTGCAATATTAATTACACACTACCTGAATATCTTGGAAACTTAACAGCCCTGAATACATTAGATCTCAGCTATAACAAACTAAGAGGAGGAATTCCAGAAACCTTTGAACAGCTAAGACAAATGGGATACATATATTTAACTGGAAACCTGCTCACCGGACCAGTGCCCAAGTGGACAGGGATATTTAAATCCATTGATCTTTCATATAACAACTTCAGCAATGAAAATCCAGAGCCGAAGACATGTCGAGAGCAGAACATGAATTTGTTTGCCAGCTTCGCAAAGCGCAATGACTCAGGACCTCTTTCTTGTGGGAAATCCAAAGACAGCTGTCCTAAAAATCCCTTTTATTCTTTCCATATAAATTGTGGTGGAACTAAGGTAACTATTGGAGGTACAACATATGATGAAGATATGGAAACACGTCCAGCAATATCAAAAAGGGGCGGTGAAAATTGGGCATTTAGTAGCACTGGTCACTTCTGGAATATTAGTGATAATTATAACGATTACCAACTCATAGCAAATAATGATTCAAGGCTCGACGTGCCTGATACCGAAGCTGAATTGTATATGAATGCACGTGTTTCCCCTATATCCTTGACTTATTATGGGTTTTGCCTGGAAAATGGAAACTACAAAGTAAGGCTCCACTTTGCAGAGATTATGTTCACTGATGATAACACATATAGCAGCCTAGGCAGACGTGTATTTGATGTCTACATTCAGGGAGAGCAGGTATTGAAGAATTTCAATATAAAAAGTGAAGCACAAGGAGTTGGTAAGGCGCTTACAAAAACATTTTCTACTTATGTCAGTAGTAATGACTTAGAGATTCGCTTCTATTGGGCTGGGAAAGGAACAACATATGGTTCCCTTATATCAGCTATATCTGTCACTTCTGATTTTCCACCTCCATCGAAAATTATATCTACAAGGGTTGTGGTTGGAATTGTGGCTGCAGCACTGGTTATTATCATCTTGATTGTTTATTTACTTTGGTTGAGAGGTTGTCTGTGGAAAAGAAACTCATTAGTTAAAGAGTTTAAGGATTTAGAACTGCAAACCGGTTTATTTACATTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATACTGCCAATAAGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTGGATGGCACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGATTGTTCTTTGGTGTATGAATACATGGAAAACAATAGCCTTGCAAGTGCTTTGTTCGGCTGTGAAGCAACCCGTTTAAAATTGAATTGGCCAACAAGGCACAAGATCTGTGTTGGTATTGCTAGAGGGTTGGCTTTCTTGCATGAAGAATCAAGATTGAAAATTGTTCATAGAGACATTAAGGCCACTAATGTGTTGCTTGACAAAGATTTGAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTCAATGAGGAGGAAAATACTCATATTAGCACCCGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCTGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAAAGCAACACTCTTCACCGGCCAAAGGAAGAAGCTTTGTATCTTCTTAATTGGGCACATTTGTTAAAAGAGAAAGGTAACCTAATGGAGCTAGTTGATGCAAGGTTGGGTTCTGATATCAATGAAGAAGAGGCAATGGTGATGATCAAGGTGGCCCTCCTATGCACAAATGTCACTTCAAACCTTAGGCCCTCCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTGGTTCCAGAATTTGTTTCAGATCCAAATGAGGTAATGGATGAGATTAAGTTAGAGGCAATGCGACAATATTACAATCAAATAGATGAAAATAAGATAAGTGAGACGCAAACACAAAGTCAGAGTTTATCAATTGATGGGCCATGGACTGCTTCATCTTCATCCACTGCAGACCTCCATCCTATCAAACTTGGTTCTTCTAATTGGGAGAAAAGACATTAA 2934 0.3943 MITTSRFLFLSLLAFCFTSLGSRDASQLPEYEVQALKDIAKTLGKKDWDFSTNPCSGQPNWTTPDSSNGVTNTVSCNCSVPNDNFCHVVTIILRGQNLQGRLPPELIRLPYLRYIYFDLNYLSGTIPKEWGSMNLVNIALTGNRLTGLVPAEIGNISTLQMLGLGNNNLSGNLPPELGNLTRLEYLSLYSNNFTGELPKTFSRLTTLETVYLSDNQFSGSIPNFIQRWTNLQILEIQGSGFSGPIPKGISFLQNLTSLVISDLNGPDSTFPPLKNMKSLDTLILRSCNINYTLPEYLGNLTALNTLDLSYNKLRGGIPETFEQLRQMGYIYLTGNLLTGPVPKWTGIFKSIDLSYNNFSNENPEPKTCREQNMNLFASFAKRNDSGPLSCGKSKDSCPKNPFYSFHINCGGTKVTIGGTTYDEDMETRPAISKRGGENWAFSSTGHFWNISDNYNDYQLIANNDSRLDVPDTEAELYMNARVSPISLTYYGFCLENGNYKVRLHFAEIMFTDDNTYSSLGRRVFDVYIQGEQVLKNFNIKSEAQGVGKALTKTFSTYVSSNDLEIRFYWAGKGTTYGSLISAISVTSDFPPPSKIISTRVVVGIVAAALVIIILIVYLLWLRGCLWKRNSLVKEFKDLELQTGLFTLRQIKAATNNFDTANKIGEGGFGPVYKGTLLDGTTIAVKQLSSKSKQGNRDCSLVYEYMENNSLASALFGCEATRLKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLHRPKEEALYLLNWAHLLKEKGNLMELVDARLGSDINEEEAMVMIKVALLCTNVTSNLRPSMSSVVSMLEGKTVVPEFVSDPNEVMDEIKLEAMRQYYNQIDENKISETQTQSQSLSIDGPWTASSSSTADLHPIKLGSSNWEKRH* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01460 977 Pfam Malectin domain 404 582 IPR021720 -
Rops7g01460 977 MobiDBLite consensus disorder prediction 939 966 - -
Rops7g01460 977 Gene3D Transferase(Phosphotransferase) domain 1 707 912 - -
Rops7g01460 977 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 588 - -
Rops7g01460 977 SUPERFAMILY Protein kinase-like (PK-like) 640 916 IPR011009 -
Rops7g01460 977 ProSiteProfiles Protein kinase domain profile. 657 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01460 977 SMART serkin_6 657 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01460 977 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Rops7g01460 977 Pfam Protein tyrosine and serine/threonine kinase 697 899 IPR001245 GO:0004672|GO:0006468
Rops7g01460 977 FunFam Putative LRR receptor-like serine/threonine-protein kinase 705 912 - -
Rops7g01460 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Rops7g01460 977 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Rops7g01460 977 Gene3D - 403 588 - -
Rops7g01460 977 Gene3D Phosphorylase Kinase; domain 1 625 706 - -
Rops7g01460 977 SUPERFAMILY L domain-like 83 359 - -
Rops7g01460 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 697 - -
Rops7g01460 977 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Rops7g01460 977 Gene3D Ribonuclease Inhibitor 198 267 IPR032675 -
Rops7g01460 977 Gene3D Ribonuclease Inhibitor 268 383 IPR032675 -
Rops7g01460 977 MobiDBLite consensus disorder prediction 939 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01460 Rops-Chr7 21102096 21139563 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01460 25 962 Receptor kinase-like Gene Family AT1G53420 50.710 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01460 PK_Tyr_Ser-Thr 8.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01460 - - gmx:100785451 1166.37