Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01458 ATGCCAAAGCTGTCGTGGCCGAGGCGGAGGGAGAAGGAGTCGGTGGCGCGGCTGAGGAGGGTTGTTCTCAAGTCACAAAATCTTTCTGGCACACTCCCAAGGGAACTGGTGAAGTTGCCTTACCTCCAAGAAATTGACCTCACACGCAACTACCTCAATGGTACAATCCCTCCACAATGGGGTACCATGAATCTTGTCAACATTTCCCTTTATGGAAACCGACTAACGGGTCCAATCCCAAAAGAACTAGGAAACATCACCACCCTGAAAAGTTTGATCCTGGAGTTCAATCAATTATCTGGAAGGCTTCCTCCGGAGCTTGGGAATCTTCCCCAGCTTGAAAGACTGTTTCTTACCTCCAACTATTTTACTGGAAATTTACCTGCAACATTTGCTAGGCTCACTACATTGAAACATGTTCGACTTGGTGATAATCAATTCTCTGGAACTATACCCAATTTCATTCAGAGTTGGACAAGTCTTGAGAGGCTGGTGATGCAAGGGAGTGGTTTGAGCAGCCCAATTCCTTCTGGAATTTCGTTTCTAAAAAACCTCACTGACTTGAGAATTAGTGACTTGAAAGGTCTAGATTCTCATTTTCCGCAACTTAGTAACTTGAGAAATTTGGAAACACTGGTGCTGAGGAGTTGCAATCTTATAGGAACGGTTCCTGATTATCTTGGAAATATGACTAATTTAAGATCATTAGACCTCAGTTTTAACAAATTAAGTGGACAGATTCCGAACGCCTTGGGTGGCCTAGAGAACATTAATATACTATACTTAACTGGAAACCTTTTTACTGGACCACTTCCCAATTGGATAGCTAGACCAGACTACACAGATCTCACATATAACAACTTGAGCATCGAACACCCAGAGCAGTTGACATGTCAACAGGGAACCGTGAACTTGTTTGCATCATCTTCGGAAGGAAATAACTCGGGAATGGTTCCATGTTTGGGAATCAGTGACTGTCCTAAAACTTGGTACTCTCTCCACATAAATTGTGGTGGGAAGCTCATAACTTCTAATGGAAGCATGACATATGATGATGATTCACATGAAGCTGGACCTGCAACATTTTACCGCAGTGGATCAAACTGGGCATTTAGCAACACTGGTCACTTCTTTGATAGTAGCAAGATAGACTATTATACCTGGTCTAATTCAACTAAGCTGGCTATGGACAATGCTGAACTGTATATGAATGCACGTGTTTCTCCCCTTTCTCTCACATATTATGGATTTTGCCTGGGAAATGGAAACTACACAGTAAACCTCCATTTTGCAGAGATAATGTTCACTGATGATCAAACATATTACAGCCTCGGGAGGCGTGTGTTTGACATCTATATTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAATGAAGCAGGAGGATTTGGTAAGGCAGTCATAAAAAATTTCACTGCCATTGTGACTAGTAATACCTTGGAGATCCGCTTGCATTGGGCTGGAAAAGGGACAACTGGTATCCCATTTGGATCAGTACATGGTCCTCTTATATCAGCTATATCAGTTGATCCTGACTTTACACCCCCAGAGGAAAAGGGAAGTAGCACCCCTGTGTGGCCTATTGTTGCAGGTGTAGTTGCTGGAGTACTTGTTATCATCATGGTATTTGGCATAGCTTGGTGGAGAGGATGTCTAGGACACAAAGGTTCATTAGAAAGAGAGCTAAGGGGTTTAGATCTGCAAACTGGCATATTTACCTTACGGCAAATCAGAGCAGCAACTAACAACTTTGATATTGACTTCAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTCAGATAGCACAGTCATTGCAGTTAAGCAGCTTTCTTCTAAATCAAATCAAGGGAATCGTGAGTTTATAAATGAGATTGGCACAATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAATTGTTGCTGATATATGAATACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGCCCGAGAAAAAGGTCAATTGAAGTTGGATTGGTCAACAAGGCAAAGGATTTGCGTTGGTATTGCTAGAGGGTTGGCTTACCTCCATGAAGAGTCGAGGCTAAAGATAGTTCACAGGGATATTAAGGCCACTAATGTGTTACTGGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAGCTCAAAGATGATGGCCATACCCACATAACCACCAGAATAGCTGGCACATATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGAGAAAGCGGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATTGTTAGTGGGAAGAACAACACCATGAGCTGGTCAAAGGAAGAATGCTTCTCTCTTGTTGATTGGGCACGTCTCTTGAAAGAAGGAGGCAATCTAATGGACCTAGTTGATGAGAGGTTGGGTAAACACTTCAATAAAGAGGAAGCAATGGTCATGATCAATGTGGCTCTTTTATGCACCCAGGTTTCTCCAAATCACCGACCCACCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTTGTTCAAGAGGTGATGCCAGACAAAGATCAGGTATTCAAAGGCAAGAACTTGGAGATGATCCAACAGTATTATCAGAAGAGAGAAAAAAATAAGTCCTCTGAGATTCAAGAAGAGAGCATCTCAATAGATGAAACTGCTGCATTTGTGTCTGATACAGATCTGCATTCTTTCAGCGTTGATTCTTCTTACTGA 2796 0.421 MPKLSWPRRREKESVARLRRVVLKSQNLSGTLPRELVKLPYLQEIDLTRNYLNGTIPPQWGTMNLVNISLYGNRLTGPIPKELGNITTLKSLILEFNQLSGRLPPELGNLPQLERLFLTSNYFTGNLPATFARLTTLKHVRLGDNQFSGTIPNFIQSWTSLERLVMQGSGLSSPIPSGISFLKNLTDLRISDLKGLDSHFPQLSNLRNLETLVLRSCNLIGTVPDYLGNMTNLRSLDLSFNKLSGQIPNALGGLENINILYLTGNLFTGPLPNWIARPDYTDLTYNNLSIEHPEQLTCQQGTVNLFASSSEGNNSGMVPCLGISDCPKTWYSLHINCGGKLITSNGSMTYDDDSHEAGPATFYRSGSNWAFSNTGHFFDSSKIDYYTWSNSTKLAMDNAELYMNARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYYSLGRRVFDIYIQRKLVLKDFNIANEAGGFGKAVIKNFTAIVTSNTLEIRLHWAGKGTTGIPFGSVHGPLISAISVDPDFTPPEEKGSSTPVWPIVAGVVAGVLVIIMVFGIAWWRGCLGHKGSLERELRGLDLQTGIFTLRQIRAATNNFDIDFKIGEGGFGPVYKGVLSDSTVIAVKQLSSKSNQGNREFINEIGTISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFAREKGQLKLDWSTRQRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDDGHTHITTRIAGTYGYMAPEYAMHGYLTEKADVYSFGVVALEIVSGKNNTMSWSKEECFSLVDWARLLKEGGNLMDLVDERLGKHFNKEEAMVMINVALLCTQVSPNHRPTMSSVVSMLEGKTVVQEVMPDKDQVFKGKNLEMIQQYYQKREKNKSSEIQEESISIDETAAFVSDTDLHSFSVDSSY* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01458 931 SMART serkin_6 592 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01458 931 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 894 - -
Rops7g01458 931 Pfam Leucine rich repeat 207 266 IPR001611 GO:0005515
Rops7g01458 931 FunFam Putative LRR receptor-like serine/threonine-protein kinase 668 875 - -
Rops7g01458 931 Pfam Malectin domain 332 515 IPR021720 -
Rops7g01458 931 SUPERFAMILY Protein kinase-like (PK-like) 576 872 IPR011009 -
Rops7g01458 931 Gene3D - 330 519 - -
Rops7g01458 931 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 330 520 - -
Rops7g01458 931 Gene3D Phosphorylase Kinase; domain 1 564 667 - -
Rops7g01458 931 Pfam Protein tyrosine and serine/threonine kinase 596 863 IPR001245 GO:0004672|GO:0006468
Rops7g01458 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Rops7g01458 931 CDD STKc_IRAK 598 865 - -
Rops7g01458 931 Gene3D Ribonuclease Inhibitor 129 319 IPR032675 -
Rops7g01458 931 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 200 296 - -
Rops7g01458 931 ProSiteProfiles Protein kinase domain profile. 592 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01458 931 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 127 194 - -
Rops7g01458 931 Gene3D Ribonuclease Inhibitor 4 128 IPR032675 -
Rops7g01458 931 SUPERFAMILY L domain-like 16 288 - -
Rops7g01458 931 Gene3D Transferase(Phosphotransferase) domain 1 668 880 - -
Rops7g01458 931 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 561 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01458 Rops-Chr7 21025447 21035716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01458 23 893 Receptor kinase-like Gene Family AT1G53420 56.606 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01458 PK_Tyr_Ser-Thr 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01458 - - psat:127081874 1510.35