Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01456 ATGGCATCCGAGATGATCAAAGGCAAACGTTATGGGAGAAAGGCTGATGTGTACAGTTTTGGGCTTATTCTGTGGGAGATGGTGAGTGGACAAGTGCCATTTGAGGACTTGACTCCAACCCAGGTTGCTTTTGCAGTGGCACATAAAAATTCTAGGCCTGTTATTCCTTCAAACTGCCCAATTGTTATTAGAGATTTGATTCAGCAATGTTGGTCCTTGAAACCAGAGATGAAGCCCGAGTTCTGGCAGGTTGTTCGGGTTTTGGAGCAATTATATCAATCTTTACTTGCTAATGGAACCCTGAATCTGGTGCAAAAACCCCGTAGATGA 330 0.4394 MASEMIKGKRYGRKADVYSFGLILWEMVSGQVPFEDLTPTQVAFAVAHKNSRPVIPSNCPIVIRDLIQQCWSLKPEMKPEFWQVVRVLEQLYQSLLANGTLNLVQKPRR* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01456 109 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01456 109 Gene3D Transferase(Phosphotransferase) domain 1 1 106 - -
Rops7g01456 109 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
Rops7g01456 109 Pfam Protein tyrosine and serine/threonine kinase 1 88 IPR001245 GO:0004672|GO:0006468
Rops7g01456 109 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01456 Rops-Chr7 21020989 21021318 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01456 1 103 MAP Kinase Kinase Kinase AT5G58950 63.107 4.09e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops7g01456 PK_Tyr_Ser-Thr 5.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01456 - - gmx:100784454 159.458