Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01455 ATGCCAATTAGCATGAAGATGATCACATCCTCTCAGTTTCTCCTCCTTTCACTCCTTTCCATTTGGTTCACTTGTTTTGCTTTTGGAGCCACCACTCTGCCACCCCATGAAGTGCAAGCGCTGAAAGATATAGGGAAAACACTTGGTAAGACGAATTGGGACTTCAATATGAATCCATGCAACTGGACAACAACACGTGTGAATAAAGTCCAATGCAATTGCTCCATACCCAATGACACCTTCTGCCATGTTGTTAAAATAGTTCTGAAATTACAAAATCTTCAAGGCAGTCTCCCACCAGAACTGATCAAATTGCCCTACCTCCAAGAAATTGACCTTACCCGTAACTACCTCAGTGGTACAATTCCTAGAGAATGGGGCTCCTCCAGTCTTGTAGAAATTTCTCTACTTGGGAACCGACTAACTGGTCCAATCCCAACAGAGCTGGGAAACCTCACCAATCTCAAACGTTTGATCCTTGAGTTTAATCAGTTCACTGGAAATCTTCCTCCGGAACTTGGGAACCTTGTCCACATGGAACAATTGCATCTAAGCTCCAACAACTTAACTGGAAAATTGCCTGAAACTCTTGCAAGGCTTACTACAATCAAGGAATTCCGAATCAGTGACAATCAATTCTCTGGAAACATACCTGATTTTATTCAAAGATGGACAAGTCTTAATCAACTAGTAATTCAAGGGAGTGGTTTAAGTGGACCAATTCCTTCTGGAATTTCATTTCTGCAAAACTTAACTGACTTGAGGATTAGTGATTTGAATGGCCCAGAATCTTCTTTTCCACTAGTTGATAATATGACTGGACTAGAAACATTGATATTAAGGAGTTGCAATATTAATGACACACTTCTTCAATATTTTGCAAACTTGATAAATTTGACAGTCCTAGACCTCAGCTTTAACAAATTAAGAGGAGAGATTCCAACAAAGCTTGAAGGGTTAATAAGAGCAACCTACATATATTTAACAGGAAACTTTCTCACTGGACCAGTGCCCGAGTGGAAGAACCCTAAGAAATACTTAGATCTTTCATATAACAATTTCAGTGTTGAAAACCCAGAGCCAGAGACATGTTACCAGCAAAATATGAACTTGTTTGCAAGCTTTTCAAGGGATAACTTAGGACCAGTTTCTTGTAAGAGCAGCACTAGATTCTGTACTAAAACCGTTAAATCTCTACATATAAATTGTGGTGGAAATCAGACTATCATTGGAGGTATAACATATGATGAAGATATAGATCCAGCAGAACCAGCAGTATATAGACAGAGTAGTGACAACTGGGCATTTAGCAATACCGGTCACTTCTTGGATAATAATACCATAACAAAGCTGCTCCCGTATACCACAGAGAATGAAACTAGGCTTTATATGACAGATATTGAATTATATAAGAATGCACGTATTTCCCCCTTGTCTTTGACTTATTATGGATTTTGCTTGGAAAATGGAGACTACACAGTAAAGCTCCATTTTGCTGAGATAATGTTCACTGATGATGACACATATAGCAGCCTAGGAAGGCGTCTATTTGATGTCTACATTCAGGGAAAGCAGGTACTGAAGGATTTCAATATTGCAAACGACGCACAAGGAGTTGGCAAGGAACTTATAAAACAATTTCCTGCTCATGTGAGTAGTAATGATTTAGAGATCCGCTTCTATTGGGCTGGCAGAGGGACAACATATATCCCATATAAATCAGTAAATGGTCCACTTATATCAGCTATATCTGTCACGTATGACTCTACAGGTGGCATATCTGCAGCGACAATTGTTGCAATTGTGGCTGCAGCAGTGATTTTTGTCATCTTGATTGTTGTTGGCATACGTTGGAGGGGAGGTTGTCTAGGAAAGAAGCATTTATTAGTAAGAGAGCTAAAAGATTTAGATCTGCCAGCTCGGTTATTTACCTTGCATCAAATCAAAGCAGCAACAAATACCTTTGATATTTCTAATAAGATTGGAGAAGGAAGCTTTGGTCCTGTTTATAAGGGCATTTTGTCAAATGGCACAGTAATTGCAGTGAAACAGCTTTCACCTAAATCTGAGCAAGGAAACCGTGAGTTCATAAATGAGATAGGCATGATCTCAGCTTTGCAACACCCTTATCTTGTTAAACTTTATGGCTGTTGTGTTGAGGGAGATCAGTTGTTGGTGGTATATGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTCGGCCCAGAAGAATGCCATTTAAAATTGAATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCCAGAGGTTTAGCTTTCTTGCATGAAGAATCAAGACTTAAAGTTGTTCACAGGGACGTAAAGGCTGCTAATGTGTTGCTTGACAAAGACCTGAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTCAATGAGGAGGACAATACTCACATAAGCACAAGAATAGCTGGGACATATGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTAACTGATAAAGCAGATGTCTATAGTTTCGGAATTGTTGCATTGGAAATTGTAAGTGGAAAGAGGAACATTATTCACCGGTCAAAGGAAGAAGCATTCTTTCTTCTTGATTGGGCACATCTGTTGAAAGAGAGAGGTAACCTACTAGAGCTAGTTGATCCAAGGTTGGGTTCAGATTTCAATGAAGAGGAGGCAATGGTGATGGTCAAAGTGGCCCTTCTATGCACCAATGCCACTTCAAACCTTAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAGGGCACAACAGTGGTTCCTGAATTTGTTTCACATCCAAGTGAGGTAATGGATGAGATGAGGTTGGAGACAATGAGACGGTTTTACAGTCAGGTAGATGGAAATAAAATAAGTGAGGCAAGAAGTCTGAGCTTGACAATTGATGTGCCATGGACTGCTTCATCTTCATCAACTGCAGACATCAATCCTGTCCACCTTGATGATTCCTATTTGGAGGAAAAGAAATTAAGAGAATCTGTATAA 3021 0.3976 MPISMKMITSSQFLLLSLLSIWFTCFAFGATTLPPHEVQALKDIGKTLGKTNWDFNMNPCNWTTTRVNKVQCNCSIPNDTFCHVVKIVLKLQNLQGSLPPELIKLPYLQEIDLTRNYLSGTIPREWGSSSLVEISLLGNRLTGPIPTELGNLTNLKRLILEFNQFTGNLPPELGNLVHMEQLHLSSNNLTGKLPETLARLTTIKEFRISDNQFSGNIPDFIQRWTSLNQLVIQGSGLSGPIPSGISFLQNLTDLRISDLNGPESSFPLVDNMTGLETLILRSCNINDTLLQYFANLINLTVLDLSFNKLRGEIPTKLEGLIRATYIYLTGNFLTGPVPEWKNPKKYLDLSYNNFSVENPEPETCYQQNMNLFASFSRDNLGPVSCKSSTRFCTKTVKSLHINCGGNQTIIGGITYDEDIDPAEPAVYRQSSDNWAFSNTGHFLDNNTITKLLPYTTENETRLYMTDIELYKNARISPLSLTYYGFCLENGDYTVKLHFAEIMFTDDDTYSSLGRRLFDVYIQGKQVLKDFNIANDAQGVGKELIKQFPAHVSSNDLEIRFYWAGRGTTYIPYKSVNGPLISAISVTYDSTGGISAATIVAIVAAAVIFVILIVVGIRWRGGCLGKKHLLVRELKDLDLPARLFTLHQIKAATNTFDISNKIGEGSFGPVYKGILSNGTVIAVKQLSPKSEQGNREFINEIGMISALQHPYLVKLYGCCVEGDQLLVVYEYMENNSLAHALFGPEECHLKLNWPTRQKICVGIARGLAFLHEESRLKVVHRDVKAANVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKRNIIHRSKEEAFFLLDWAHLLKERGNLLELVDPRLGSDFNEEEAMVMVKVALLCTNATSNLRPSMSSVLSMLEGTTVVPEFVSHPSEVMDEMRLETMRRFYSQVDGNKISEARSLSLTIDVPWTASSSSTADINPVHLDDSYLEEKKLRESV* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01455 1006 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 624 730 - -
Rops7g01455 1006 Pfam Malectin domain 398 583 IPR021720 -
Rops7g01455 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Rops7g01455 1006 Gene3D Ribonuclease Inhibitor 187 264 IPR032675 -
Rops7g01455 1006 FunFam Leucine-rich repeat transmembrane protein kinase 196 398 - -
Rops7g01455 1006 Gene3D Transferase(Phosphotransferase) domain 1 731 936 - -
Rops7g01455 1006 Pfam Protein tyrosine and serine/threonine kinase 657 922 IPR001245 GO:0004672|GO:0006468
Rops7g01455 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 957 - -
Rops7g01455 1006 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 39 193 - -
Rops7g01455 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 396 588 - -
Rops7g01455 1006 ProSiteProfiles Protein kinase domain profile. 655 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01455 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase 731 938 - -
Rops7g01455 1006 Gene3D Ribonuclease Inhibitor 36 186 IPR032675 -
Rops7g01455 1006 SUPERFAMILY L domain-like 53 366 - -
Rops7g01455 1006 Gene3D - 397 589 - -
Rops7g01455 1006 Gene3D Ribonuclease Inhibitor 265 381 IPR032675 -
Rops7g01455 1006 Pfam Leucine rich repeat 274 331 IPR001611 GO:0005515
Rops7g01455 1006 CDD STKc_IRAK 661 928 - -
Rops7g01455 1006 Gene3D Phosphorylase Kinase; domain 1 625 730 - -
Rops7g01455 1006 SUPERFAMILY Protein kinase-like (PK-like) 638 950 IPR011009 -
Rops7g01455 1006 SMART serkin_6 655 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01455 Rops-Chr7 21010430 21020629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01455 30 986 Receptor kinase-like Gene Family AT1G53420 54.592 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01455 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01455 - - gmx:100791136 1493.79