Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01452 ATGTTGCAGGGAGAACAGGTATTGAAGAATTTCAATTTAAAAAGTGAAGCACATGGAGTTGGTAAGGCGCTTACAAGAAATTTTTCTGCTAATGTCAGTAGTAATGACTTAGAGATTCGCTTCTATTGGGCTGGGAAAGGAACAGATGGTTCCCTTATATCAGCTATATCTGTCACTTCTGACTTTCCACCTCCATCGAAAAGTATATCTACAAGGGTTGTGGTTGGAATAGTGGTTGCAGCACTAGTTATTGTCATCTTGATTGTTTATTTACTTTGGTTGAGAGGTTGTCTAGGGAAAAGAAACTCATTAGCTAAAGAGTTAAAAGATTTAAAACTGCAAACTGGTTTATTTACATTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATATTGCCAATATGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTAGATGGCACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGAGTTCATAAATGAGATAGGCATGATTTCAACTTTGCAACACCCTCATCTTGTCAAACTATATGGCTGCTGTGTTGAAGGCGATCAGTTGTTGCTGGTGTATGAATACATGGAAAACAATAGCCTTGCACGTGCTTTGTTTGGCTGTGAAGCAACCCGTTTAAAATTGAATTGGCCAACAAGGCACAAGATCTGTGTTGGTATTGCTAGAGGGTTGGCTTTCTTGCATGAAGAATCAAGACTGAAAATTGTTCATAGAGACATTAAGGCCACTAATGTGTTGCTTGACAAAGATTTGAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTCAATGAGGAGGACAATACTCATATTAGCACCCGAATTGCTGGGACTTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCTGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAGAGCAACACTCTTCACCGACCAAATGAAGAAGCTTTGTATCTTCTTAATTGGGCACATTTGTTAAAAGAGAAAGGTAACCTAATAGAGCTAGTTGATCCAAGGTTGGGTTCTGATATCAATGAAGAAGAGGCAATGGTGATGATCAAGGTGGCCCTCTTATGCACAAATGTCACTTCAAACCTTAGGCCCTCCATGTCTTCAGTGGTAAGCATGCTTGAAGGAAAAACTGTGGTTCCAGAATTTGTTTCAGATCCAAATGAGGTAATGGATGAGATTAAGTTAGAGGCAATGCGACAATATTACAATCAAATAGATAAAAATAAGATAAGTGAGACGCAAACACAAAATCAGAGTTTATCAATTGATGGGCCATGGACTGCTTCATCTTCATCCACTGCAGACCTCTATCCTGCCTCGGTTTCTTACGAAGCAACCATGATGTATATTTCCTAA 1440 0.3875 MLQGEQVLKNFNLKSEAHGVGKALTRNFSANVSSNDLEIRFYWAGKGTDGSLISAISVTSDFPPPSKSISTRVVVGIVVAALVIVILIVYLLWLRGCLGKRNSLAKELKDLKLQTGLFTLRQIKAATNNFDIANMIGEGGFGPVYKGTLLDGTTIAVKQLSSKSKQGNREFINEIGMISTLQHPHLVKLYGCCVEGDQLLLVYEYMENNSLARALFGCEATRLKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLHRPNEEALYLLNWAHLLKEKGNLIELVDPRLGSDINEEEAMVMIKVALLCTNVTSNLRPSMSSVVSMLEGKTVVPEFVSDPNEVMDEIKLEAMRQYYNQIDKNKISETQTQNQSLSIDGPWTASSSSTADLYPASVSYEATMMYIS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01452 479 FunFam Putative LRR receptor-like serine/threonine-protein kinase 206 413 - -
Rops7g01452 479 Gene3D Phosphorylase Kinase; domain 1 98 205 - -
Rops7g01452 479 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 99 205 - -
Rops7g01452 479 SMART serkin_6 130 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01452 479 Pfam Protein tyrosine and serine/threonine kinase 132 399 IPR001245 GO:0004672|GO:0006468
Rops7g01452 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Rops7g01452 479 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 439 - -
Rops7g01452 479 Gene3D Transferase(Phosphotransferase) domain 1 206 413 - -
Rops7g01452 479 Pfam Malectin domain 2 48 IPR021720 -
Rops7g01452 479 Gene3D - 1 61 - -
Rops7g01452 479 CDD STKc_IRAK 136 403 - -
Rops7g01452 479 SUPERFAMILY Protein kinase-like (PK-like) 114 416 IPR011009 -
Rops7g01452 479 ProSiteProfiles Protein kinase domain profile. 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01452 Rops-Chr7 20953662 20956373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01452 2 463 Receptor kinase-like Gene Family AT1G07650 60.632 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01452 PK_Tyr_Ser-Thr 8.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01452 - - gmx:100785451 685.641