Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01448 ATGGAAACAGGTCCAGCAATATCAAAAAGGGTCGGTGAAAATTGGGCATTTAGTAGCACTGGTCTGTATAGTGATAACCAACTCATACAAAAAAATCATTCAAGGCTCGACGTTCCTGATACTGAAGTTGAACTGTATATGAATGCACGTGTTTCCCCTATTTCCTTGACTTATTATGGGTTTTGCCTGGAAAATGGAAACTACACAGTAAAGCTCCACTTTGCAGAGATTGTGTTCACTGATGATAACACATATAACAGCCTAGGCAGACGTGTATTTGATGTCTACATTCAGGGAAAGCGGGTATTGAAGAATTTCAATATAAAAAGTGAAGCACAAGGAGTTGGTAAGGCGCTTACAAGAACGTTTTCTACTTATGTCAGTAGTAATGACTTAGAGATTCGCTTCTATTGGGCCGGGAAAGGGACAACCTATAATGAACGTTCAATAGCATATGGTTCTCTCATATCAGCTATATCTGTCACTTCTGACTTTCCACCTCCATCAAAAATTATATCTACAAGGGTTGTGGTTGGAATTGTGGCTGCAGCATTGGTTTTTGTCATCTTGATTGTTTATTTACTTTGGTTGAGAGGTTGTCTGCGGAAAAGAAACTCATTAGTTAAAGAGTTAAAGGATTTAGAACTGCAAACCGGTTTATTTACGTTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATATTGCCAATAAGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTGGATGGCACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGAGTTCATAAATGAAATAGGCATGATCTCAGCTTTGCAACACCCTCATCTTGTCAAACTATATGGCTGTTGTGTTGATGGCGATCAGTTGTTGCTGGTGTATGAATACATGGAAAACAATAGCCTTGCAAGTGCTTTGTTCGGCTGTGAAGCAACCCGTTTAAAATTGAATTGGCCAACAAGGCACAAGATCTGTGTTGGTATTGCTAGAGGGTTGGCTTTCTTGCATGAAGAATCAAGATTGAAAATTGTTCATAGAGACATTAAGGCCACTAATGTGTTGCTTGACAAAGATTTGAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTCAATGAGGAGGACAATACTCATATTAGCACCCGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCTGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAGAGCAACACTCTTCACCGACCAAATGAAGAAGCTTTGTATCTTCTTAATTGGGCACATTTGTTAAAAGAGAAAGGTAACCTAATGGAGCTATTTGATCCAAGGTTGGGTTCTGATATCAATGAAGAAGAGGCAATGGTGATGATCAAGGTGGCCCTCCTATGCACAAATGTCACTTCAAACCTTAGGCCCTCCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTGGTTCCAGAATTTGTTTCAGATCCAAATGAGGAAGAGAGTCAAAAGGATGTCGGTAATGGCAGCATCATCATTAGAGAAGTTGAAGAGGTCCTCGATGATGCAGTGGTTGGCAGTGGCGTTGATGTTTATGGTTGTGGTGTTGCTGGAGGGGAATTCTGGGCAATGCCGGTTTGGAAAAACTCTTATGCTACGATTACCATGTAG 1731 0.4021 METGPAISKRVGENWAFSSTGLYSDNQLIQKNHSRLDVPDTEVELYMNARVSPISLTYYGFCLENGNYTVKLHFAEIVFTDDNTYNSLGRRVFDVYIQGKRVLKNFNIKSEAQGVGKALTRTFSTYVSSNDLEIRFYWAGKGTTYNERSIAYGSLISAISVTSDFPPPSKIISTRVVVGIVAAALVFVILIVYLLWLRGCLRKRNSLVKELKDLELQTGLFTLRQIKAATNNFDIANKIGEGGFGPVYKGTLLDGTTIAVKQLSSKSKQGNREFINEIGMISALQHPHLVKLYGCCVDGDQLLLVYEYMENNSLASALFGCEATRLKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLHRPNEEALYLLNWAHLLKEKGNLMELFDPRLGSDINEEEAMVMIKVALLCTNVTSNLRPSMSSVVSMLEGKTVVPEFVSDPNEEESQKDVGNGSIIIREVEEVLDDAVVGSGVDVYGCGVAGGEFWAMPVWKNSYATITM* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01448 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Rops7g01448 576 Gene3D Transferase(Phosphotransferase) domain 1 309 524 - -
Rops7g01448 576 Gene3D Phosphorylase Kinase; domain 1 199 308 - -
Rops7g01448 576 SMART serkin_6 233 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01448 576 SUPERFAMILY Protein kinase-like (PK-like) 216 512 IPR011009 -
Rops7g01448 576 Pfam Malectin domain 22 159 IPR021720 -
Rops7g01448 576 FunFam Putative LRR receptor-like serine/threonine-protein kinase 309 516 - -
Rops7g01448 576 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 521 - -
Rops7g01448 576 CDD STKc_IRAK 239 506 - -
Rops7g01448 576 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 164 - -
Rops7g01448 576 Pfam Protein tyrosine and serine/threonine kinase 235 501 IPR001245 GO:0004672|GO:0006468
Rops7g01448 576 Coils Coil 197 217 - -
Rops7g01448 576 ProSiteProfiles Protein kinase domain profile. 233 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01448 576 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 202 308 - -
Rops7g01448 576 Gene3D - 4 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01448 Rops-Chr7 20810413 20817224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01448 13 518 Receptor kinase-like Gene Family AT1G07650 62.669 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01448 PK_Tyr_Ser-Thr 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01448 - - gmx:100785451 745.732