Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01445 ATGAGAAGGTTGTGCACTTCAAAGAAAAGCCTTTTTATGTGTGGGTTTGATGGTTGTGGCATGAGATTTGCTTACAAACATGTGAGAGATAACCATGAAAAAACTGGGAAACATGTTTTTACCCTTGGGGATTTTGAAGAAGCTGATGAAGAATTCAGGTCAAGGCCCAGGGGAGGGAAGAAGAGAAAATATCCTACTGTTGAAACAATAGTAAGGAAGAGAGTTACCCCACTAAGTCAATTAGAGAACTGGTTACTTATGCAGGATAGTGAGGAAGACGTGCATTGA 288 0.4028 MRRLCTSKKSLFMCGFDGCGMRFAYKHVRDNHEKTGKHVFTLGDFEEADEEFRSRPRGGKKRKYPTVETIVRKRVTPLSQLENWLLMQDSEEDVH* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01445 95 ProSitePatterns Zinc finger C2H2 type domain signature. 14 38 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01445 Rops-Chr7 20708853 20709243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01445 12 42 C2H2 Transcription Factor Family AT1G72050 70.968 3.72e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01445 K09191 - gmx:100800196 146.747