Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01441 ATGATTACTCCATCTCGATTTCTCTTCCTTTCACTCCTTGCATTTTGCTTCACATCACTTGCTTCAAGAGACGCTTCTCAGCTGCCAGAGTATGAAGTGCAAGCTCTGAAAGACATAGCCAAAACACTTGGTAAGAAGGATTGGGACTTCAGCACAAATCCATGCAGTGGACAACCAAACTGGACTACACCTGATTCCTCAAATGGAGTAACAAATACTATTTCCTGTAATTGCTCTGTCCCCAATGACAACTTCTGTCATGTTGTTGCCATAACGCTGTCAGGACAAAATCTTCAAGGCAGACTCCCACCGGAACTGATCAGGCTGCCATACCTCCAAGAAATTAACCTTAACCTCAACTACCTTGGTGGTACGATTCCTAAAGAATGGGGCTCCATGAATCTTGTGGAGATTCACCTTACTGGAAATCGATTAACGGGTTCAATACCAGCAGAGATAGGAAATATATCAACTCTCCAAAATTTGGCCCTCGGGAACAATAATTTGTCTGGAAATCTTCCTCCAGAACTTGGGAATCTTACACGCCTTGAAAAGCTGTCACTTTACTCCAACAATTTTACTGGAGAGTTGCCCAAGACCTTTTCGAGGCTTACTACATTGGATTCTGTCTGTCTTAGTGACAATCAATTTTCTGGAAGCATTCCCAATTTTATTCAAAGATGGACAAGTCTTCAATACCTAGAGACTCGGGGGAGCGGTTTTAGTGGACCAATTCCGAAAGGAATTTCATTTCTACAAAACTTAACCTATTTGGTAATTAGCGACTTGAATGGACCTGATTCTACTTTTCCACCACTTGAGAATATGAAATCATTGTACACATTGATACTAAGGAGTTGCAATATTAATGACACACTACCTGAATATCTTGGAAACTTAACAACCCTGAATACATTAGATCTCAGCTATAACAAACTAAGAGGAGGAATACCAGGAACCTTTGAACAGCTAAGTAAAGTGGGATACATATATTTAACTGGAAACCTGCTCACCGGACCAGTGCCCAAGTGGACAGGGATATTTAAATCCATTGATCTTTCATATAACAACTTCAGCAATGAAAATCCAGAGCCGAAGACATGTCGAGAGCAGAACATGAATTTGTTTGCCAGCTTCGCAAACCGCAATGACTCAGGACCTCTTTCTTGTGGGAAGTCCAAAGACACCTGTCCTAAAACCTTTTATTCTTTCCACATAAATTGTGGTGGAACTAAGGTAACGATTGGAGGTACAACATACGATGAAGATATTGAAACAAGTCCAGCAATATCAAAAAGGGTCGGTGAAAATTGGGCATTTAGTAGCACTGGTCACATCTTAGATAATGATAAAGATTACCAACTCATAGAAAATAATCATTCAAGGCTCTACGTGCCTGATACTCAAGCTGAACTATATATGAATGCACGTGTTTCCCCTATTTCCTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAACTACACAGTAAAGCTCCACTTTGCAGAGATTATGTTTACTGATGATAACACATATAGCAGCCTAGCTAGACGTGTATTTGATGTCTACATTCAGGGAGAGTGGGTATTGAAGAATTTCAATATAAAAAGTGAAGCACAAGGAGTTGGTAAGGCGCTTACAAGAACATTTTCTACTTATGTCAGTAGTAATGACTTAGAGATTCGTTTCTATTGGGCCGGGAAAGGGACAACCATTATTCCATATCAATCAGTATATGGTTCTCTTATATCGGCTATATCTATCACTTCTGACATTCCACCTCCATCGAAAAGTATATCTATAGGGGTTGTGGTTGGAATTGTGGCTGCAGCACTAGTTATTGTCATCTTAATTATTTTTTTACTTTGGTTGAGAGGTTGTCCAGGGAAAAGAAACTCATTGGTTAAAGAGTTTAAGGATTTAGAACTACAAACTGGTTTATTTACATTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATATTGCCAATATGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTGGATGACACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGAGTTCATAAATGAGATAGGCATGATTTCAGCTTTGCAACACCCTCATCTTGTCAAACTGTATGGTTGTTGTGTTGATGGAGATCAGTTGTTACTGGTGTATGAATACATGGAAAACAATAGCCTTGCACGTGCTTTGTTCGGCCCTGATGCAACCCGTTTAAAATTGAATTGGCCAACAAGACACAAGATCTGTGTTGGTATTGCTAGAGGGTTGGTTTTCTTGCATGAAGAATCAAGATTGAAAATTGTTCATAGGGACATTAAGGCAACTAATGTGTTGCTTGACAAAGATCTGAACCCAAAGATATCTGATTTTGGTTTGGCTAAGCTCAATGAAGAGGACAATACTCATATTAGCACCCGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCTGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAATGACCAACACCATTCACCGGCCAAAGGGTGAAGCATTATATCTTCTTAATTCGGTGCATCTGTTAAAAGAGAAGGGTAACCTAATGGAGCTAGTTGATCCAAGGTTGGGTTCTGATTTCAATGAAGAAGAGGCAAAGGTGATGATCAAGGTGGCCCTTCTATGCACAAATGTCACTTCAAATCTTAGGCCCTCCATGTCTTCAGTGGTAAGTATGCTTGAAGGCAAAATTGTGGTTCCGGAATTTGTTTCAGATCCAAGTGAGGTAATGGATGAGATTAAGTTGGAGGCAATGCGACAATATTACAATCAAATAGATGAAAATAAGATAAGTGAGAAGCAAACACAAAGTCAGAGTTTATTAATTGATGGGTCATGGACTGCTTCATCTTCATCCACTGCAGACCTCTATCCTATCCAACTTGGTTCTTCTTATCATGAGTAA 3018 0.3953 MITPSRFLFLSLLAFCFTSLASRDASQLPEYEVQALKDIAKTLGKKDWDFSTNPCSGQPNWTTPDSSNGVTNTISCNCSVPNDNFCHVVAITLSGQNLQGRLPPELIRLPYLQEINLNLNYLGGTIPKEWGSMNLVEIHLTGNRLTGSIPAEIGNISTLQNLALGNNNLSGNLPPELGNLTRLEKLSLYSNNFTGELPKTFSRLTTLDSVCLSDNQFSGSIPNFIQRWTSLQYLETRGSGFSGPIPKGISFLQNLTYLVISDLNGPDSTFPPLENMKSLYTLILRSCNINDTLPEYLGNLTTLNTLDLSYNKLRGGIPGTFEQLSKVGYIYLTGNLLTGPVPKWTGIFKSIDLSYNNFSNENPEPKTCREQNMNLFASFANRNDSGPLSCGKSKDTCPKTFYSFHINCGGTKVTIGGTTYDEDIETSPAISKRVGENWAFSSTGHILDNDKDYQLIENNHSRLYVPDTQAELYMNARVSPISLTYYGFCLANGNYTVKLHFAEIMFTDDNTYSSLARRVFDVYIQGEWVLKNFNIKSEAQGVGKALTRTFSTYVSSNDLEIRFYWAGKGTTIIPYQSVYGSLISAISITSDIPPPSKSISIGVVVGIVAAALVIVILIIFLLWLRGCPGKRNSLVKEFKDLELQTGLFTLRQIKAATNNFDIANMIGEGGFGPVYKGTLLDDTTIAVKQLSSKSKQGNREFINEIGMISALQHPHLVKLYGCCVDGDQLLLVYEYMENNSLARALFGPDATRLKLNWPTRHKICVGIARGLVFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGMTNTIHRPKGEALYLLNSVHLLKEKGNLMELVDPRLGSDFNEEEAKVMIKVALLCTNVTSNLRPSMSSVVSMLEGKIVVPEFVSDPSEVMDEIKLEAMRQYYNQIDENKISEKQTQSQSLLIDGSWTASSSSTADLYPIQLGSSYHE* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01441 1005 ProSiteProfiles Protein kinase domain profile. 660 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01441 1005 Gene3D - 401 591 - -
Rops7g01441 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 591 - -
Rops7g01441 1005 CDD STKc_IRAK 666 933 - -
Rops7g01441 1005 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Rops7g01441 1005 SUPERFAMILY L domain-like 49 363 - -
Rops7g01441 1005 Pfam Protein tyrosine and serine/threonine kinase 662 930 IPR001245 GO:0004672|GO:0006468
Rops7g01441 1005 SUPERFAMILY Protein kinase-like (PK-like) 643 948 IPR011009 -
Rops7g01441 1005 Gene3D Transferase(Phosphotransferase) domain 1 736 940 - -
Rops7g01441 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 970 - -
Rops7g01441 1005 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Rops7g01441 1005 Gene3D Ribonuclease Inhibitor 198 264 IPR032675 -
Rops7g01441 1005 SMART serkin_6 660 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01441 1005 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Rops7g01441 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 943 - -
Rops7g01441 1005 Gene3D Phosphorylase Kinase; domain 1 629 735 - -
Rops7g01441 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Rops7g01441 1005 Pfam Malectin domain 403 586 IPR021720 -
Rops7g01441 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Rops7g01441 1005 Gene3D Ribonuclease Inhibitor 265 384 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01441 Rops-Chr7 20565404 20610955 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01441 25 965 Receptor kinase-like Gene Family AT1G53420 54.105 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01441 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01441 - - gmx:100785451 1224.54