Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01438 ATGGCTCATGAATATGAAATGCATGGTTATTTGACTGACAAAGCCGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAGAGCAACACCATTCACCGACCAAAGGAAGAAGCTTTGTATCTTCTTAATTGGGCACATATGTTAAAACAGAAAGGTAATCATATGGAGCTAGTTGATCCAAGGTTGGGCTCAGATTTCCATGAAGAGGAGGCAATGGTGATGATTAATGTGGCTCTCCTATGCACCAATATCACTTCAAACCTTAGGCCCTCCATGTCATCAGTGGTAAGCATGCTTGAAGGTAGAACTGTGGTTCCAAAATTTGTTTCCAATCCAAGTGAGGTAATGGATGATATTAAGTTGGAGGCAATGCGACAATATTACTGTCAAATAAATGAAAATATGATAAGTGAGACGCAAACACAAAGTCAGAGTTTATTAATTGATAGGCCATGGACTGCTTCATCTTCATCTGCTACAGACCTTTATCCTGTCCAACTTGATTCTTCTTATTAG 528 0.3883 MAHEYEMHGYLTDKADVYSFGIVALEIVSGKSNTIHRPKEEALYLLNWAHMLKQKGNHMELVDPRLGSDFHEEEAMVMINVALLCTNITSNLRPSMSSVVSMLEGRTVVPKFVSNPSEVMDDIKLEAMRQYYCQINENMISETQTQSQSLLIDRPWTASSSSATDLYPVQLDSSY* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01438 175 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 142 - -
Rops7g01438 175 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Rops7g01438 175 SUPERFAMILY Protein kinase-like (PK-like) 1 125 IPR011009 -
Rops7g01438 175 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01438 Rops-Chr7 20546530 20549626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01438 1 165 Receptor kinase-like Gene Family AT1G07650 53.939 8.96e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01438 PK_Tyr_Ser-Thr 2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01438 - - gmx:100785451 272.707