Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01437 ATGCTTTCTATGGAGAATGCTGAGCTATACATGAATGCACGAGGTTTTCCTAATTCATTGATGTATTATGGATTTTGCCTGGGAAATGGAAACTACACGGTAAATCTACATTTTGCGGAAATCATGTTCACTAATGATCAAACATTTAACAGCCTAGGAAGGCGTGTATTTGATATCTACATTCAGGGAAACCTAGTGCAGAAAGACGTTAATATTGCAGAAGAAGCAGGAAGAGCTGGTAAAGCAGTCACCAAATCTTTCACTGTTGTTGTGACTAGTAGTACCTTGGAGATCCGCTTATACTGGGCTGGACGAGGGACAATAAATATCCCATCTAGAACAGTGCATGGTCCTCTTATATCAGCTATATCTGTGGAATCTGACTTTACACCTCCCTTTGAAAATGGAAGCAACATATCTGCAGGAACTTTGGTTGGAATTTTGGCTGCAGTAGCAGTTGTTATCATCCTGGTATTTGGTATACTTTGGTCGAAAGGTTGTTTGAAAAAGAAAAACTCTTTAGCAAGAGAGCTAAAGGGTGTAGACCTGCAAGCAAGTTTATTTACCTTAAGACAAATCAAAGCGGGAACAAACAACTTTAATATTGCGAATCAAATTGCGTACCTCCATGAAGAATCAAGACTGAAGATTGATCATAGAGACATCAAGACCACTAATGTGTTGCTCGATAAAGATCTCAATCCAAAAATATCTGACTTTGGTTTGGCCAAGCTTGATGAAGAGGACAACACCCATATTAGCACCCGAATAGCCGGGACATAA 783 0.3946 MLSMENAELYMNARGFPNSLMYYGFCLGNGNYTVNLHFAEIMFTNDQTFNSLGRRVFDIYIQGNLVQKDVNIAEEAGRAGKAVTKSFTVVVTSSTLEIRLYWAGRGTINIPSRTVHGPLISAISVESDFTPPFENGSNISAGTLVGILAAVAVVIILVFGILWSKGCLKKKNSLARELKGVDLQASLFTLRQIKAGTNNFNIANQIAYLHEESRLKIDHRDIKTTNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGT* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01437 260 Pfam Protein kinase domain 188 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01437 260 ProSiteProfiles Protein kinase domain profile. 46 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01437 260 Pfam Malectin domain 4 123 IPR021720 -
Rops7g01437 260 Gene3D - 2 128 - -
Rops7g01437 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Rops7g01437 260 Gene3D Transferase(Phosphotransferase) domain 1 172 260 - -
Rops7g01437 260 SUPERFAMILY Protein kinase-like (PK-like) 201 260 IPR011009 -
Rops7g01437 260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 202 260 - -
Rops7g01437 260 FunFam Os07g0541700 protein 183 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01437 Rops-Chr7 20534272 20546656 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01437 155 260 Receptor kinase-like Gene Family AT1G07650 53.636 2.02e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01437 Malectin 7.8e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01437 - - gmx:732563 284.263