Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01428 ATGGTTGGAATTGTGGCTACAGTAGCTGTTGTTATCATCTTGGTATTTTCTATCCTATGGTGGCAAGGCTCTTTGAGAAAGAAAAACTCATTAGAAAGAGAGCTAAAGGGTTTGGACTTGCAAACGGGTTTATTTACCTTAAGGCAAATCAAAACAGCAACAAACAACTTTTATATTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGTACCATTGTGTGCCATCTATCACATTCATAAATAAAGGCCCTAAAGAACACCAAATAAAATTGGATTGGTCAACAAGACAGAAGATCTGTGTTGGTATTGCTAGAGGCTTAGCATATCTCCATGAAGAATCAAGATTGAGGGTTGTTCATAGGGACATTAAGGCCACTAATGTGTTGCTTGATAAAGACCTAAACCCAAAGTTATCTGACTTTGGTTTGGCCAAGCTCAATGAAGAGGACAATACCCATATTAGCACCCGAATAGCCGGGACATATGGATATATGGCTCCTGAATATGTAATGCATGGTTATTTGACTGACAAAGCTGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAGAGCAACACTATTCACCGACCGAAGGAAGAAGCTTTGTATCTTCTTACTTGGGCACATCTATTAAGAGAGAATGGTAAACTAATGGAGCTAGTTGATCCAAGGTTGGGTTCAAATTTCAATGAAGAAAAGGCAATGGTGATGATCAATGTGGCTCTCCTATGCACCAATGTCACTTCAAACCTTAGGCCCTCCATGTCATCAGTGAGAAAAAAAAAAGGAGCGATCTTGACTCGGGCTGAAGCAGGTGAAGCAGAGAGATTTCGAATCTTGGAATCTCGGATTGGGAATTTGGAAAACACTTTTGAAGAGCATAGGAGGCAGATCGATTCCGCCATGGACGCGTGTTTCAGAGGATGGGAAACCCTAATTCAATATGTGGTAGGAATATTAGAGGCCCTGAACGGCGGTAACCCAGGGCTGGGTCGTGACAGAGGCGGAAATTCAGAAGCAGAAAGCAACCAGTGGGAACTGAGAGACCACCAATGGGGTTCTGCACTGATTCAGAAGTTTGGAGGAAGGGGAACTCCGGTTCAAGAAAAGGTGAGGGTAGCTGCAATGGGGCTTGAGGGCCAAGCATTGGCATGGTTCAGTTGGTGGGAACCAAGCTTCTCAGGTGCAATGTGGGAAGATTTTAAAGGTGCAGTTCTGGAAAGGTTTTCTGGAGCTGATGGAGCTGGCACAAAAGATTGA 1284 0.4299 MVGIVATVAVVIILVFSILWWQGSLRKKNSLERELKGLDLQTGLFTLRQIKTATNNFYIANKIGEGGFGPVYKYHCVPSITFINKGPKEHQIKLDWSTRQKICVGIARGLAYLHEESRLRVVHRDIKATNVLLDKDLNPKLSDFGLAKLNEEDNTHISTRIAGTYGYMAPEYVMHGYLTDKADVYSFGIVALEIVSGKSNTIHRPKEEALYLLTWAHLLRENGKLMELVDPRLGSNFNEEKAMVMINVALLCTNVTSNLRPSMSSVRKKKGAILTRAEAGEAERFRILESRIGNLENTFEEHRRQIDSAMDACFRGWETLIQYVVGILEALNGGNPGLGRDRGGNSEAESNQWELRDHQWGSALIQKFGGRGTPVQEKVRVAAMGLEGQALAWFSWWEPSFSGAMWEDFKGAVLERFSGADGAGTKD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01428 427 SUPERFAMILY Protein kinase-like (PK-like) 41 268 IPR011009 -
Rops7g01428 427 Coils Coil 285 312 - -
Rops7g01428 427 FunFam Putative LRR receptor-like serine/threonine-protein kinase 78 276 - -
Rops7g01428 427 Gene3D Phosphorylase Kinase; domain 1 21 85 - -
Rops7g01428 427 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 73 - -
Rops7g01428 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Rops7g01428 427 ProSiteProfiles Protein kinase domain profile. 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01428 427 SMART serkin_6 57 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01428 427 Pfam Protein kinase domain 93 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01428 427 Gene3D Transferase(Phosphotransferase) domain 1 86 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01428 Rops-Chr7 20372009 20375200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01428 4 306 Receptor kinase-like Gene Family AT1G53420 45.580 5.19e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01428 Pkinase 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01428 - - pvy:116124448 335.109