Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01426 ATGAATTTGAGAGTGTGTGGTGTGAAATTGGTTGGCTGTGGCACGGTGGCTGAAGCGGTGGTTCAGCCGCGGACTGGCGGTGGAGCACGGTGGCTGAAGCGACTGGCCGGAGGAGAATGTGCAGTGAGAATAGCTCACCGGAGGAAGGAATTGAGAGATAGAAAATGGGTTAGGGATGGTTTAATATGGAGTTTAGTGAAAGCTTTGAAAGATATAGCAAAGACACTTGGGAAGGAGAATTGGGATTTCAACATAGATCCATGCAGTAGAGAACGTAACTGGACATCGTCTGTTCAACTGTCATCTGCAACTGCTCCTTTGTCAATGGCACCGGTCTTGGAGTCCAATCAAATTTCTGGAAAGCTTCCTCCTGAACTTGGGAATCTAGCCCAGATTCAAAGATTGCTACTTACCTCCAACAATTTTACCGGAGAGCTACCTGTAACATTGGCCAAGCTCACTACATTGCAGGATTTTCAAATTGGGGACAATAAATTCTCTGGGAAGATACCTGATTTTATTCAAAGTTGGCCTGGTCTGCAGAAACTAGTGATTGAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACTTCTAGGAAACTTAACTGACTTGAGAATTAGTGATCTGAATGGGTCTGAATCTTCACCTTTTCCACAAATTAAAAATCAGACAATGAGAAATCTATATTTAAGTGGAAATCGTCTCACGGGACCAGTGCCTACATGGATAGAGAAAGCTGACAATGTAGGCATTGTTTCATGTTTGAAAGGCTTTGTCTGTCCAAAAACTCCCTTATACTCTCTTCATATAAATTATGGTGGAAAACTGGTAGCAGTCAATGGAAGCACATATGATGATGATTCAGATGCAATGGGACCAGCTAGATTCCACCAAAGTGGATCAAGAAATTGGGCATTTAGCACCACTGGTAACTTCATGGATAATGAGCGAGGAGACTATTATACCTGGTCAAATAGTTCTAAGCTTTCTATGATCAATGCCGAACTGTACATGAATGCACGAGTTTCTCCTACTTCTTTGACTTATTATGGATTTTGTCTGGGAAATGGAAACTACACGGTAAATCTACATTTTGCGGAAATCATGTTCACTGATGATCAAACATATAGCAGCCTAGGAAGGCGTGTATTTGATATCTACATTCAGGGAAAGCTGGTGAAAAAGGACTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAGTTACAAAAGCGTTCACTACAGTTGTGGCTAGTAATACCTTGGAGAGCCGCTTATATTGGGCTGGGAAAGGGACAATAGCTATCCCATTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTGAAATCTGACTTTCCATCTCCCTCCGAAAATGGAAGCAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGCGGCAGTAGCAGTTGTTATCATACTGTTTGAGAATGTCATTTTATTAATGTATCCTGTTATTAGACATTCAAAGCTAGTTAATTATCTTGATATGAAAGTAAAGGGTGTAGACCTGCAAATGGGTTTATTTACCTTAAGACAAATCAAAGCAGCAGCTAGCAACTTTGATATTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTATAAGGGAAGTTTGTCAGATAGGACATCAATAGCAGTCAAGCAGCTTTCTGCGAAATCCAAGCAAGGGAATCGTGAGTTTTTAAATGAGATCGGCATGATTTCTGCTTTGCAGCACCCAAATCTTGTTAAACTCTATGGATGTTGTGTGGAGGGAGATCAACTATTGCTGATATATGAATATATGGAAAGCAATAGCCTTGCTCGTGCTTTATTTGATGTCTATAGCTTTGGAGTTGTTGCCTTGGAAATCATAAATGGAAGGAACAATACCACTCTTCGACAAAAAGAAGAAGCATTTTATCTTCTTGATTGGGCACGTCTGTTGAAAGAGAAAGGTAATCTAATGGAACTAGTTGATAAGAGATTGGGTTCAGTTTTTAACAAAAAGGAGGTAACGGTGATGATAAAGGTGGCTCTCCTATGCACTAATGTGTCTCCAGCACTTAGGCCTACCATGTCTTCAGTGGTAAGCATGCTAGAAGGTAGAACTGTTGTTCAAGAAGTGGATTCAGAGTCAACTCCCTTATACTCTCTTCATATAAATTATGGTGGAAAACTGGTAGCAGTCAATGGAAGCACATATGATGATGATTCAGATGCAGCCGGACCAGCTAGATTCCACCAAAGTGGATCAAGAAATTGGGCATTTAGCACCACTGGTAACTTCATGGATAATGAGCGAGGAGACTATTATACCTGGTCAAATAGTTCTAAGCTTTCTATGATCAATGCTGAACTGTACATGAATGCACGAGTTTCTCCTACTTCTTTGACTTATTATGGATTTTGTCTGGGAAATGGAAACTACACGGTAAATCTACATTTTGCGGAAATCATGTTCACTGATGATCAAACATATAGCAGCCTAGGAAGGCGTGTATTTGATATCTACATTCAGGGAAAGCTGGCGCAGAAGGATTTCAATATTGCAGAAGAAGAAGGAGGAGTTGGTAAGGCAGTTACAAAACCGTTCACTGCTGTTGTGACTAGTAATACCCTGGAGATCCGCTTATATTGGGCTGGGAAAGGGACAATAGCTATCCCGTTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTGAAATCTGACTTTCCACCTCCCTCCGAAAATGGAAGCAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGCTGCAGTAGCAGTTGTTATCATACTGGTATTTGGTATACTTTGGTGGAAAGGCTGTTTGAGAAAGAAAAACTCTTTAGCAAGAGAGCTAAAGGGTGTAGACCTGCAAATGGGTTTATTTACCTTAAGACAAATCAAAGCAGCAACTAACAACTTTGATATTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAACTTTGTCAGATGGGACATTAATAGCAGTCAAGCAGCTTTCTGCGAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAGCACCCAAATCTTGTTAAACTCTATGGATGTTGTGTGGAGGGAGATCAACTATTGCTGATATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGACCAGAAGAACACCAAATAAAATTGGATTGGTCAACAAGACAAAAGATCTGTGTTGGTATTGCTAGAGGTTTAGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAAGCCACTAATGTGTTGCTTGACAAAGATCTCAACCCAAAGATATCTGACTTCGGTTTGGCCAAGCTCGATGAAGAGGACAACACTCATATTAGCACCCGAATAGCTGGGACATATGGCTATATGGCTCCAGAATATGCCATGCATGGTTATTTGACTGACAAAGCAGATGTATATAGCTTTGGAATTGTGGCCTTGGAAATTATAAATGGAAGGAACAATACCACTCATCGACAAAAAGAAGAAGCATTTTATCTTCTTGATTGGGCACGTCTGTTGAAAGAGAAAGGTAATCTAATGGAACTAGTTGATAAGAGATTGGGTTCAGTTTTTAACAAAAAGGAGGTAACGGTGATGATAAAGGTGGCTCTCCTATGCACTAATGTGTCTCCAGCACTTAGGCCTACCATGTCTTCAGTGGTAAGCATGCTAGAAGGTAGAACTGTTGTTCAAGAAGTGGATTCAGAGTCAAGTGAGGTATTGGATGAGAAGAAGTTAGAGGCAATGAGACAGTATTACCATGACCACAGTATCTCAATGGAGGGACCATGGACTGCTTCATCTACTTCAGTAACAGATCTTTATCCTGTACACCTGGATTCTTCTTACTGGGAGAAGAGAGCTTAG 3966 0.409 MNLRVCGVKLVGCGTVAEAVVQPRTGGGARWLKRLAGGECAVRIAHRRKELRDRKWVRDGLIWSLVKALKDIAKTLGKENWDFNIDPCSRERNWTSSVQLSSATAPLSMAPVLESNQISGKLPPELGNLAQIQRLLLTSNNFTGELPVTLAKLTTLQDFQIGDNKFSGKIPDFIQSWPGLQKLVIEGSGLSGPIPSGISLLGNLTDLRISDLNGSESSPFPQIKNQTMRNLYLSGNRLTGPVPTWIEKADNVGIVSCLKGFVCPKTPLYSLHINYGGKLVAVNGSTYDDDSDAMGPARFHQSGSRNWAFSTTGNFMDNERGDYYTWSNSSKLSMINAELYMNARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQGKLVKKDFNIAEEAGGVGKAVTKAFTTVVASNTLESRLYWAGKGTIAIPFRSVYGPLISAISVKSDFPSPSENGSSISAGAVVGIVAAVAVVIILFENVILLMYPVIRHSKLVNYLDMKVKGVDLQMGLFTLRQIKAAASNFDIANKIGEGGFGPVYKGSLSDRTSIAVKQLSAKSKQGNREFLNEIGMISALQHPNLVKLYGCCVEGDQLLLIYEYMESNSLARALFDVYSFGVVALEIINGRNNTTLRQKEEAFYLLDWARLLKEKGNLMELVDKRLGSVFNKKEVTVMIKVALLCTNVSPALRPTMSSVVSMLEGRTVVQEVDSESTPLYSLHINYGGKLVAVNGSTYDDDSDAAGPARFHQSGSRNWAFSTTGNFMDNERGDYYTWSNSSKLSMINAELYMNARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQGKLAQKDFNIAEEEGGVGKAVTKPFTAVVTSNTLEIRLYWAGKGTIAIPFRSVYGPLISAISVKSDFPPPSENGSSISAGAVVGIVAAVAVVIILVFGILWWKGCLRKKNSLARELKGVDLQMGLFTLRQIKAATNNFDIANKIGEGGFGPVYKGTLSDGTLIAVKQLSAKSKQGNREFLNEIGMISALQHPNLVKLYGCCVEGDQLLLIYEYMENNSLARALFGPEEHQIKLDWSTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIINGRNNTTHRQKEEAFYLLDWARLLKEKGNLMELVDKRLGSVFNKKEVTVMIKVALLCTNVSPALRPTMSSVVSMLEGRTVVQEVDSESSEVLDEKKLEAMRQYYHDHSISMEGPWTASSTSVTDLYPVHLDSSYWEKRA* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01426 1321 SUPERFAMILY Protein kinase-like (PK-like) 520 715 IPR011009 -
Rops7g01426 1321 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 955 1061 - -
Rops7g01426 1321 Pfam Protein kinase domain 988 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01426 1321 Pfam Protein tyrosine and serine/threonine kinase 536 619 IPR001245 GO:0004672|GO:0006468
Rops7g01426 1321 SUPERFAMILY Protein kinase-like (PK-like) 969 1265 IPR011009 -
Rops7g01426 1321 ProSiteProfiles Protein kinase domain profile. 534 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01426 1321 SUPERFAMILY L domain-like 113 248 - -
Rops7g01426 1321 Gene3D Ribonuclease Inhibitor 63 262 IPR032675 -
Rops7g01426 1321 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 758 1287 - -
Rops7g01426 1321 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1062 1269 - -
Rops7g01426 1321 Gene3D - 269 458 - -
Rops7g01426 1321 Gene3D - 725 914 - -
Rops7g01426 1321 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 724 914 - -
Rops7g01426 1321 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 504 609 - -
Rops7g01426 1321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Rops7g01426 1321 CDD STKc_IRAK 992 1259 - -
Rops7g01426 1321 Gene3D Transferase(Phosphotransferase) domain 1 1062 1275 - -
Rops7g01426 1321 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 268 458 - -
Rops7g01426 1321 Gene3D Phosphorylase Kinase; domain 1 499 604 - -
Rops7g01426 1321 Gene3D Phosphorylase Kinase; domain 1 952 1061 - -
Rops7g01426 1321 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 146 213 - -
Rops7g01426 1321 Gene3D Transferase(Phosphotransferase) domain 1 605 723 - -
Rops7g01426 1321 SMART serkin_6 986 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01426 1321 ProSiteProfiles Protein kinase domain profile. 986 1263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01426 1321 Pfam Malectin domain 270 453 IPR021720 -
Rops7g01426 1321 Pfam Malectin domain 726 909 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01426 Rops-Chr7 20312743 20345572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01426 621 722 Receptor kinase-like Gene Family AT1G07650 56.863 2.59e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01426 Pkinase 5.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01426 - - vum:124835551 1210.28