Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01421 ATGATCACTCTCTCTCGATTTCTCTTCCTTTCACTCTTCGCATTTTGTTTCACATCACTTGCTTTAGGAGATGCTTCTCAACTGCCAGAGGATGAAGTGCAAGCTCTGAAAGATATAGCCAAAACACTTGGTAAGAAGGATTGGGACTTCAACACAAATCCATGCAGTGGACCTAGCTGGACTAATCCTTCAATTGGACAACAAAACAATGTTTCCTGTGATTGCTCTGTCCCCAACGAGAACTTCTGCCATGTTGTTTCCATAATCCTGATTGGACAAAATCTTCAAGGCAGACTCCCGCCGGAACTTATAAGGCTGCCATACCTCCAAATAATTCGCCTTAGCCGCAACTACCTTAGTGGTACGATTCCCAAAGAATGGGGCTCCATGAATCTTGTGACGATTTACCTTTATGGAAATCGATTAACTGGTTCAATACCAGTGGAGATAGCAAATATATCCACCCTCCAAAGATTGGTCCTCGACAACAATAATTTGTCTGGAAATCTTCCCCCAGAACTTGGGAATCTTACACGCCTTGATTATCTGTTACTCGGTTCCAACAATTTTACTGGAGAGTTGCCGGAAAGCTTTTCGAGGCTTACTACATTGAAGGACGTCCGACTTAGTGACAATCAATTCTCTGGAAGCATACCCAATTTTATTCAAAGATGGACAAGTCTTCAAACACTAGTGATTCAGGGGAGCGGTTTTAGTGGACCAATTCCTTCTGGAATTTCATTTCTACAAAACTTAACCTATTTGATGATTAGCGACTTGAATGGACCTGATTCTACTTTTCCACCACTTAAGAATATGACATCATTGGAAACATTGATACTAAGGAGTTGCAATATTAATGACACACTACCTGAATATCTTGGAAACTTAACATTCCTGGATTTACTAGATCTCAGCTATAACAAACTAAATGGAGGAATTCCAGGCACCTTTGAAAGGCTAAGAGAAGTGGAACACATATATTTAACTGGAAACTTGCTCACCGGACCAGTGCCCAAGTGGACAGAGACAGCTAAATCCATAGATCTTTCCTATAACAACTTCAGCAATGAAAATCCAGAGCCAAAGACATGTCGAGAGCAGAACATGAATTTGTTTGCCAGCTTCGCAAAGCGCAATGACTCAGGACCTCTTTCTTGTGGGAAAGCCAAAGACACCTGTCCTAAAACCTTTTATTCTTTCCATATAAATTGTGGTGGAACTAAGGTAACGATTGGAGGTACAACATATGATGAAGATATAGAAACAGGTCCAGCAATATCAAAAAGGGTCGGTGAAAATTGGGCATTTAGTAGCACTGGTCACATCTTGGATAATGATAATGAATACAAACTCAAAGAAAATAATCAGTCAAGGCTCTACGTGCCTGATACTGAAGCTGAACTGTATATGAATGCACGTGTTTCCCCTATTTCCTTGACTTATTACGGGTTTTGCCTGGAAAATGGAAACTACACAGTAAAGCTCAACTTTGCAGAGATTATGTTCACTGATGATAAGACATTTAGCAGCCTAGGAAGACGTATATTTGATGTCTACATTCAGGGAAAGCGGGTATTGAAGAATTTCAATATAAAAAGTGAAGCACAAGGAGTTGGTAAGGCACTGACAAGAACATTTTATGCTTATGTCAGTAGTAATGACTTGGAGATTCGCTTCTATTGGGCCGGGAAAGGGACAATCTATATTCCACATCCATCAGTATATGGTTCTCTTATATCAGCTATATCTGTCACTTCTGACTTTCCACCTCCATCGAGAATTATATCTACAAGGGTTGTGGTTGGAATTGTGGTTGCAGCATTGGTTATTGTCATCTTGATTGTTTATTTACTTTGGTTGAGAGGTTGTCTAGGGAAAAGAAACTCATTAGTTAAAGGAGCAGAGTTAAAGGATTTAGAACTGCAAACCGGTATATTTACATTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATATTGCCAATAGGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTGGATGGCACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGAGTTCATAAATGAGATAGGCATGATCTCAGCTTTGCAACACCCTCATCTTGTCAAACTATATGGTTGTTGTGTTGATGGAGATCAGTTGTTGCTAGTGTATGAATATATGGAAAACAATAACCTTGCACGTGCTTTGTTCGGCCCTGAAGCAACCCGTTTAAAATTGAATTGGCCAACAAGGCACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTTCTTGCATGAAGAATCAAGATTGAAAATTGTTCATAGAGACATTAAGGCCACTAATGTGTTGCTTGACAACGATTTGAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTCAATGAGGAGGACAATACTCATATTAGCACCCGAATTGCTGGGACCTATGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTGACCGACAAAGCCGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAATGACCAACACCATTCACCGACCGAAGGGTGAAGCATTATATCTTCTTAATTGGGCACATCTATTAAAAGAGAAGGGTAACCTAATGGAGCTAGTTGATCCAAGGTTGGGTTCTGATTTCAATGAAGAAGAGGCAATGGTGATGATCAAGGTGGCCCTTCTATGCACAAATGTCACTTCAAACCTTAGGCCCTCTATGTCTTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTGGCTCCAGAATTTGTTTCAGATCCAAGTGAGGTAATGGATGAGATTAAGTTGGAGGAAATGCGACAGTATTACAATCAAATAGATGAAAATAAGATAAGTGAGACGCAAACACTAAGTCAGAGTTTATCAATTGATGGGCCACGTACTGCTTCATCTTCATCCACTACAGACCTCTATCCTGTCCAACTTGGTTCTTCTTATTGGGAGAAAAGTAATTAA 3024 0.3998 MITLSRFLFLSLFAFCFTSLALGDASQLPEDEVQALKDIAKTLGKKDWDFNTNPCSGPSWTNPSIGQQNNVSCDCSVPNENFCHVVSIILIGQNLQGRLPPELIRLPYLQIIRLSRNYLSGTIPKEWGSMNLVTIYLYGNRLTGSIPVEIANISTLQRLVLDNNNLSGNLPPELGNLTRLDYLLLGSNNFTGELPESFSRLTTLKDVRLSDNQFSGSIPNFIQRWTSLQTLVIQGSGFSGPIPSGISFLQNLTYLMISDLNGPDSTFPPLKNMTSLETLILRSCNINDTLPEYLGNLTFLDLLDLSYNKLNGGIPGTFERLREVEHIYLTGNLLTGPVPKWTETAKSIDLSYNNFSNENPEPKTCREQNMNLFASFAKRNDSGPLSCGKAKDTCPKTFYSFHINCGGTKVTIGGTTYDEDIETGPAISKRVGENWAFSSTGHILDNDNEYKLKENNQSRLYVPDTEAELYMNARVSPISLTYYGFCLENGNYTVKLNFAEIMFTDDKTFSSLGRRIFDVYIQGKRVLKNFNIKSEAQGVGKALTRTFYAYVSSNDLEIRFYWAGKGTIYIPHPSVYGSLISAISVTSDFPPPSRIISTRVVVGIVVAALVIVILIVYLLWLRGCLGKRNSLVKGAELKDLELQTGIFTLRQIKAATNNFDIANRIGEGGFGPVYKGTLLDGTTIAVKQLSSKSKQGNREFINEIGMISALQHPHLVKLYGCCVDGDQLLLVYEYMENNNLARALFGPEATRLKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDNDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGMTNTIHRPKGEALYLLNWAHLLKEKGNLMELVDPRLGSDFNEEEAMVMIKVALLCTNVTSNLRPSMSSVVSMLEGKTVAPEFVSDPSEVMDEIKLEEMRQYYNQIDENKISETQTLSQSLSIDGPRTASSSSTTDLYPVQLGSSYWEKSN* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01421 1007 Gene3D - 398 588 - -
Rops7g01421 1007 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 29 261 - -
Rops7g01421 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Rops7g01421 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 734 - -
Rops7g01421 1007 MobiDBLite consensus disorder prediction 970 992 - -
Rops7g01421 1007 CDD STKc_IRAK 665 932 - -
Rops7g01421 1007 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515
Rops7g01421 1007 Pfam Protein tyrosine and serine/threonine kinase 661 929 IPR001245 GO:0004672|GO:0006468
Rops7g01421 1007 SUPERFAMILY L domain-like 54 339 - -
Rops7g01421 1007 Gene3D Transferase(Phosphotransferase) domain 1 735 942 - -
Rops7g01421 1007 Gene3D Phosphorylase Kinase; domain 1 625 734 - -
Rops7g01421 1007 Gene3D Ribonuclease Inhibitor 197 372 IPR032675 -
Rops7g01421 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Rops7g01421 1007 ProSiteProfiles Protein kinase domain profile. 659 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01421 1007 SUPERFAMILY Protein kinase-like (PK-like) 642 945 IPR011009 -
Rops7g01421 1007 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Rops7g01421 1007 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01421 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 398 588 - -
Rops7g01421 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 962 - -
Rops7g01421 1007 Pfam Malectin domain 400 583 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01421 Rops-Chr7 20191585 20226952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01421 22 988 Receptor kinase-like Gene Family AT1G53420 53.619 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01421 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01421 - - gmx:100785451 1243.8