Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01420 ATGAATATAAGTTTCCCTCGTTTCTTCTTCCCTTTACTCCTTTCTGCCTTTTGTTTTGCCTTCTTAGCTTTTGGAGCCACCCTGTCAGAAGATGAAGTGGAAGCTTTGAAAGATATAGCAAAGACACTTGGGAAGGAGAATTGGGATTTCAGGGTAGATCCATGCAGTGGAGAACGTAACTGGACATCGTCTGTTCAAGTCAAAGGAAGCGAAAATGCTGTCAGCTGCAATTGCTCCTTTGTCAATGGCACCGTTTGTCATGTCACTAACATACTTTTGAAACAACAAAATCTCCCTGGCACTCTCCCAAGAGAACTAATCAGGTTGCCTTACCTTCAAGAAATTGACCTTACTCGCAACTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGAAACTTGTCAGCATTTCCCTGCTTGGAAATCGATTAACGGGTTCAATACCAGTAGAGATAGCAAACATATCCACTCTCCAAAGTTTGGTCTTGGAGTCCAATCAATTTTCTGGAAAGCTTCCTCCTGAACTTGGGAATCTAACCCAGATTCAAAGATTGCTACTTACCTCCAACAATTTTACTGGAGAGCTACCTGTAAAATTGGCCAAGCTCACTACATTGCAGGATTTTCGAATTGGGGACAATAAATTCTCTGGGAAGATACCTGATTTTATTCAAAGTTGGCATGGTCTGCAGAAACTAGTGATTGAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACTTCTAGGAAACTTAACTGACTTGAGAATTAGTGATCTGAATGGGTCTGAATCTTCACCTTTTCCACAAATTAAAAATCAGACAATGAGAAATCTGATTATGAGGAATTGCAACATCAATGGAACACTACCTTTCTATCTTGGGACAATGACGGGTTTAAAAAACTTAGACCTCAGCTTTAATAAATTGAGTGGGCAAATTCCGAGTAACTATGATGCCCTAAGAAAAGTGGATTACATATATTTAACTGGAAACCTTCTCACGGGACCAGTGCCAGCATGGATAGAGAAAGCTGACAATGTAGATATTTCATATAATAACTTCAGCATTGGAAGCCAAGGGAGTCAGAATTGTCAAGATGGAAATGTGAACTTGTTTGCTAGCTCTTTGACGCACAATGACTCAGGCATTGTTTCATGTTTGAAAGGCTTTGTCTGTCCAAAAACTCCCTTATACTCTCTTCATATAAATTGTGGTGGAAAGCTGGTAGCAGTCAATGGAAGCACATATGATGATGATTCAGATGCAGCCGGACCAGCTAGATTCCACCAAAGTGGATCAAGAAATTGGGCATTTAGCACCACTGGTAACTTCATGGATAATGAGCGAGGAGACTATTATACCTGGTCAAATAGTTCTAAGCTTTCTATGATCAATGCTGAACTGTACATGAATGCACGAGTTTCTCCTACTTCTTTGACTTATTATGGATTTTGTCTGGGAAATGGAAACTACACGGTAAATCTACATTTTGCGGAAATCATGTTCACTGATGATCAAACATATAGCAGCCTAGGAAGGCGTGTATTTGATATCTACATTCAGGGAAAGCTGGCGCAGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAGTTACAAAACCGTTCATTGCTGTTGTGACTAGTAATACCCTGGAGATCCGTTTATATTGGGCTGGGAAAGGGACAATAGCTATCCCATTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTGAAATCTGACTTTCCACCTCCCTCCGAAAATGGAAGCAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGCTGCAGTAGCAGTTGTTATCATACTGGTATTTGGTATACTTTGGTGGAAAGGCTGTTTGAGAAAGCAAAACTCTTTAGCAAGAGAGCTAAAGGGTGTAGACCTGCAAATGGGTTTATTTACCTTAAGACAAATCAAAGCAGCAACTAACAACTTTGATATTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAACTTTGTCAGATGGGACATTAATAGCAGTCAAGCAGCTTTCTGCGAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAGCACCCAAATCTTGTTAAACTCTATGGATGTTGTGTGGAGGGAGATCAACTATTGCTGATATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGACCAGAAGAACACCAAATAAAATTGGATTGGTCAACAAGACAAAAGATCTGTGTTGGTATTGCTAGAGGTTTAGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAAGCCACTAATGTGTTGCTTGACAAAGATCTCAACCCAAAGATATCTGACTTCGGTTTGGCCAAGCTCGATGAAGAGGACAACACTCATATTAGCACCCGAATAGCTGGGACATATGGCTATATGGCTCCAGAATATGCCATGCATGGTTATTTGACTGACAAAGCAGATGTATATAGCTTTGGAATTGTGGCCTTGGAAATTATAAATGGAAGGAACAATACCACTCATCGACAAAAAGAAGAAGCATTTTATCTTCTTGATTGGGCACGTCTGTTAAAAGAGAAAGGTAATCTAATGGAACTAGTTGATAAGAGATTGGGTTCAGTTTTTAACAAAGAGGAGGTAACGGTGATGATAAAGGTGGCTCTCCTATGCACTAATGTGTCTCCAGCACTTAGGCCTACCATGTCTTCAGTGGTAAGCATGCTAGAAGGTAGAACTGTTGTTCAAGAAGTGGATTCAGAGTCAAGTGAGGTATTGGATGAGAAGAAGTTAGAGGCAATGAGACAGTATTACCATGACCACAGTATCTCAATGGAGGGACCATGGACTGCTTCATCTACTTCAGTAACAGATCTTTATCCTGTACACCTGGATTCTTCTTACTGGGAGAAGAGAGATTAG 2997 0.4051 MNISFPRFFFPLLLSAFCFAFLAFGATLSEDEVEALKDIAKTLGKENWDFRVDPCSGERNWTSSVQVKGSENAVSCNCSFVNGTVCHVTNILLKQQNLPGTLPRELIRLPYLQEIDLTRNYLNGTIPKEWGSMKLVSISLLGNRLTGSIPVEIANISTLQSLVLESNQFSGKLPPELGNLTQIQRLLLTSNNFTGELPVKLAKLTTLQDFRIGDNKFSGKIPDFIQSWHGLQKLVIEGSGLSGPIPSGISLLGNLTDLRISDLNGSESSPFPQIKNQTMRNLIMRNCNINGTLPFYLGTMTGLKNLDLSFNKLSGQIPSNYDALRKVDYIYLTGNLLTGPVPAWIEKADNVDISYNNFSIGSQGSQNCQDGNVNLFASSLTHNDSGIVSCLKGFVCPKTPLYSLHINCGGKLVAVNGSTYDDDSDAAGPARFHQSGSRNWAFSTTGNFMDNERGDYYTWSNSSKLSMINAELYMNARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQGKLAQKDFNIAEEAGGVGKAVTKPFIAVVTSNTLEIRLYWAGKGTIAIPFRSVYGPLISAISVKSDFPPPSENGSSISAGAVVGIVAAVAVVIILVFGILWWKGCLRKQNSLARELKGVDLQMGLFTLRQIKAATNNFDIANKIGEGGFGPVYKGTLSDGTLIAVKQLSAKSKQGNREFLNEIGMISALQHPNLVKLYGCCVEGDQLLLIYEYMENNSLARALFGPEEHQIKLDWSTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIINGRNNTTHRQKEEAFYLLDWARLLKEKGNLMELVDKRLGSVFNKEEVTVMIKVALLCTNVSPALRPTMSSVVSMLEGRTVVQEVDSESSEVLDEKKLEAMRQYYHDHSISMEGPWTASSTSVTDLYPVHLDSSYWEKRD* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01420 998 Gene3D - 402 591 - -
Rops7g01420 998 Pfam Malectin domain 403 586 IPR021720 -
Rops7g01420 998 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Rops7g01420 998 ProSiteProfiles Protein kinase domain profile. 663 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01420 998 CDD STKc_IRAK 669 936 - -
Rops7g01420 998 Pfam Protein kinase domain 665 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01420 998 SMART serkin_6 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01420 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 32 191 - -
Rops7g01420 998 SUPERFAMILY L domain-like 78 343 - -
Rops7g01420 998 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Rops7g01420 998 Gene3D Transferase(Phosphotransferase) domain 1 739 952 - -
Rops7g01420 998 SUPERFAMILY Protein kinase-like (PK-like) 646 942 IPR011009 -
Rops7g01420 998 Gene3D Ribonuclease Inhibitor 198 276 IPR032675 -
Rops7g01420 998 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Rops7g01420 998 Gene3D Ribonuclease Inhibitor 277 383 IPR032675 -
Rops7g01420 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Rops7g01420 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 591 - -
Rops7g01420 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 964 - -
Rops7g01420 998 Gene3D Phosphorylase Kinase; domain 1 629 738 - -
Rops7g01420 998 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01420 Rops-Chr7 20131106 20142374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01420 22 964 Receptor kinase-like Gene Family AT1G53420 57.966 0.0 1062
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01420 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01420 - - gmx:732563 1547.33