Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01418 ATGCTGTTTGTGATGTCAAGTCTCAAACATGTATCTGTGTTCATCTTTGTGTTCCTGGCTTTGAATTGCTTCCATGAGTTTGGATCCAACGCTCAACTCATTCCACAAGATGAAGTGAAATTACTACAAACAATATCAGACAAGGTAGAAAACTTGAATTGGAAAGTTACAGAACGTTCCTGCAACGGGGACAGAGGATTTGCTAACCAGGAAATTTCGGGGGATCAAGTTAAAAGGAATGTCACGTGCGATTGCTCTTTCAACTCTCGCACCATTTGCCATGTAACATTCATCTTCCTCAAGGGGCTGAATATCTCTGGAGTTATACCCAGTGAATTTGGAAATCTCACTCACCTGAACACACTTGATCTCACACGGAATTGTCTAAATGGCTCAATTCCAAAGAGTCTTGGACGCCTCTCTCTTGTGACACTGTCAATGTTGGGAAATAGACTTAGTGGTCCAATTCCCTCAGAGATTGGGAATATTTCTAGTCTGCAAGAACTGAACTTGGAAAATAATCTACTTGAAGGACCTCTTCCTCCCAGCCTTGGAAATTTGAGGAACTTGCTAAAATTATTGCTTTCTGCAAATAACTTTACAGGGACAATACCAGAGGCATTTGGCAATCTAAAGAATCTCACTCAATTTAGGATAGATGGGAGCAATTTATCTGGGAAGATCCCCAGTTTTATTGGGAACTGGACCAAACTTCAAAGATTGGATTTGCAGGGCACATCCTTGGAAGGGCCAATTCCTCCCACCATATCTGACTTGAAAAATTTGACGGAATTGAGAATATCTGATTTGAAGGGACCAACTATGACATTCCCTGATCTGAAGGGTATGACAAGCATGGAAAGACTGGAATTGAGAAATTGCTTGATCACTGGTCCCATTCCAGACTACATTGGAGAAATGGGAGATTTAAGAACTCTGGATTTGAGCTTCAACAGGTTGACTTCAATCCCAGATTCATTTCAGAACTTGGAACCAAATTTTATGTTTCTGGCCAACAACTCTCTGAGTGGATCAATTCCTGGATGGATACTGAGCAGCAAAAGGAACATTGATTTATCTTTCAACAATTTTACACAGTCTTCTGCATCTAGTTGCCAGCTCGCGGATGTGAACTTAGCTTCCAGCCACTCTCCTTCAGCAAACACTTCATTGTCTTGTTTGAAGATGGACCTACCTTGTTCAGGAAAACCTCAGTATCATTCACTGTTCATAAACTGTGGAGGACCTGCAACAAAGTTTGATGGCAATGAATATGAAGCTGACACAAATCCACTTGGCATTTCAAACTTTGTTGTCAGTGATAACGGCAAATGGGCTTATAGCAGTGCAGGAGTATATCTAGGAAATGACAAAGTTAATTATCTAGCAACAAATGAGTTCTCCTTGAATATTAATGGCACTGACTTCTACCAAACAGCCCGCAATGCCCCTCTGTATCTTAATTACTATGGCCTTTGTATGCTGAATGGTAATTATAAAGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATAAACAAACTTTTAGCAGCAATGGAAGGCGCGTATTTGATGTTTCAATTCAAGGTGTTAAATATTTGAAAGATTTTAACATTGTGAAAGAAGCTGGTGGAGTTGGCCAGGGAATCCCTAGGGAGTATAACGTTAATGTTACTGATAGCACCTTGGAAATCCACCTATCCTGGGCAGGGAAAGGAACTAATGCCCTTCCTGTGAGAGGTGTATATGGACCTCTTATATCTGCTATCACTGTGACCCCAAATTTTAAAATTCCTTCAAAGGGGCTGTCCACTGGAGCAATTGTTGGAATTGTTGTTGCATCATGCGTGTTTGTAATACTGATACTATTTGTCCTATGGAAGATGGGTTTCCTTTGTGGGAAAGATCCAACAGACCAAGAACTTCTAGATCTGAAAACGGGCTATTTTAGTTTGAGACAAATCAAAGCTGCTACTAATAACTTTGACCCAGCAAATAAGATAGGCGAAGGAGGCTTTGGGCCAGTGTACAAGGGTGTATTGTCAGATGGTGCTGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCAAAGCAAGGGAACCGTGAATTCGTTAATGAAATAGGGATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTGCTTATATATGAATACATGGAGAACAACAGTCTTGCTCGTGCACTTTTTGGTAAAGAAGAACAAAGGATGCACTTGGATTGGCCAACAAGAATGAAGATCTTTGTGGGGATAGCAAGGGGATTGGCTTATCTACATGAGGAGTCAAGGTTGAAAATAGTACACAGGGATATTAAGGCAACCAATGTCTTACTTGATAAGCATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAATACCCATATCAGCACAAGAATAGCTGGGACAATTGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACTGACAAAGCAGATGTCTATAGCTTTGGAGTTGTAGCTTTGGAGATAGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTTTATCTTCTGGATTGGGCATATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAGACTACTCCCAAGAAGAGGCCATGAGAATGCTGCAGTTGGCACTCTTGTGCACCAATCCATCTCCAACTCTTAGACCACCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAACTCCAATTCAAGCACCAATAATCAAACGCGGTGAAGGTGGACAAGATGCAAGATTTAAAGCCCTTGAGTTGCTTTCACAAGACAGTCAAACTCATGTTTCTTCTACATTTGTACACGATAGTGCTGAGCAAAGAAGCAAATCAACGGATGGACCATGGAATGACTCCTCCATATCTCTTCCAAGTAGAGACGATTATTCTTCATCCAGTAAACTTCTTTGA 3030 0.4122 MLFVMSSLKHVSVFIFVFLALNCFHEFGSNAQLIPQDEVKLLQTISDKVENLNWKVTERSCNGDRGFANQEISGDQVKRNVTCDCSFNSRTICHVTFIFLKGLNISGVIPSEFGNLTHLNTLDLTRNCLNGSIPKSLGRLSLVTLSMLGNRLSGPIPSEIGNISSLQELNLENNLLEGPLPPSLGNLRNLLKLLLSANNFTGTIPEAFGNLKNLTQFRIDGSNLSGKIPSFIGNWTKLQRLDLQGTSLEGPIPPTISDLKNLTELRISDLKGPTMTFPDLKGMTSMERLELRNCLITGPIPDYIGEMGDLRTLDLSFNRLTSIPDSFQNLEPNFMFLANNSLSGSIPGWILSSKRNIDLSFNNFTQSSASSCQLADVNLASSHSPSANTSLSCLKMDLPCSGKPQYHSLFINCGGPATKFDGNEYEADTNPLGISNFVVSDNGKWAYSSAGVYLGNDKVNYLATNEFSLNINGTDFYQTARNAPLYLNYYGLCMLNGNYKVKLHFAEIMFSDKQTFSSNGRRVFDVSIQGVKYLKDFNIVKEAGGVGQGIPREYNVNVTDSTLEIHLSWAGKGTNALPVRGVYGPLISAITVTPNFKIPSKGLSTGAIVGIVVASCVFVILILFVLWKMGFLCGKDPTDQELLDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGKEEQRMHLDWPTRMKIFVGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSDYSQEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGKTPIQAPIIKRGEGGQDARFKALELLSQDSQTHVSSTFVHDSAEQRSKSTDGPWNDSSISLPSRDDYSSSSKLL* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01418 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 595 - -
Rops7g01418 1009 Pfam Malectin domain 409 590 IPR021720 -
Rops7g01418 1009 ProSiteProfiles Leucine-rich repeat profile. 309 330 IPR001611 GO:0005515
Rops7g01418 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 737 - -
Rops7g01418 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Rops7g01418 1009 Gene3D - 407 595 - -
Rops7g01418 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Rops7g01418 1009 ProSiteProfiles Protein kinase domain profile. 662 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01418 1009 Pfam Leucine Rich Repeat 310 330 IPR001611 GO:0005515
Rops7g01418 1009 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Rops7g01418 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 965 - -
Rops7g01418 1009 Pfam Protein tyrosine and serine/threonine kinase 666 932 IPR001245 GO:0004672|GO:0006468
Rops7g01418 1009 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 185 215 IPR000225 GO:0005515
Rops7g01418 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Rops7g01418 1009 CDD STKc_IRAK 668 935 - -
Rops7g01418 1009 Gene3D Ribonuclease Inhibitor 171 274 IPR032675 -
Rops7g01418 1009 SMART serkin_6 662 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01418 1009 SUPERFAMILY Protein kinase-like (PK-like) 645 934 IPR011009 -
Rops7g01418 1009 SMART LRR_typ_2 187 210 IPR003591 -
Rops7g01418 1009 SMART LRR_typ_2 116 140 IPR003591 -
Rops7g01418 1009 SMART LRR_typ_2 307 329 IPR003591 -
Rops7g01418 1009 SUPERFAMILY L domain-like 89 330 - -
Rops7g01418 1009 Gene3D Phosphorylase Kinase; domain 1 634 737 - -
Rops7g01418 1009 Gene3D Transferase(Phosphotransferase) domain 1 738 942 - -
Rops7g01418 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Rops7g01418 1009 Gene3D Ribonuclease Inhibitor 275 384 IPR032675 -
Rops7g01418 1009 Gene3D Ribonuclease Inhibitor 40 165 IPR032675 -
Rops7g01418 1009 MobiDBLite consensus disorder prediction 971 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01418 Rops-Chr7 20097161 20108464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01418 1 1000 Receptor kinase-like Gene Family AT1G53440 63.511 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01418 PK_Tyr_Ser-Thr 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01418 - - gmx:121173337 1561.97