Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01397 ATGAACGCCACCACTTCTCAAACCTTCACCCAATTCTACGACTCATGGTTCGACCACCTGCACCGCCTGGTCCAGCAGCTCTCCACGGCGGACCCAAACGACGATAACCACCTCGTCGAGAAGATGATGTCGCACCATGAGGACTATTACAGAGCCAAGTCAGTGGCGGCAGAGAAGGACCCACTTCATGTGTTGGCTTCTCCTTGGGCCACCACCCTTGAACGTTCCCTTCATTGGATCACAGGGTGGCGCCCCACCACCGCTTTCCACCTCATCTACACCGAATCATCACTCCTCTTTGAGTCTCACATCATTGATATCCTCCGTGGACTTCACACCGGTGACCTCGGTGATCTCTCTCCCACTCAGTTCCGCCGTGTCAGTGAGTTACAATGTGACACCGTGAAGGAAGAGAATGCAATAACGGAGGAGCTATCAGAGTGGCAGGACAGTGTGAGCGAGCTGATGGGCCCACGAGCAGATATCAATGAGAAGATCGGACGGCTGGTAAGCATTATAAAGAAAGCGGATGATCTACGGCTGAGAACGTTGAGGAGTGTGGTGGGTTTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATCGCCTCAGCCGAGTTGTTCGTTGGGATCCGCGGTTGGGGATTGAATCACGACCGTCCACGTCACAGGTGA 672 0.5432 MNATTSQTFTQFYDSWFDHLHRLVQQLSTADPNDDNHLVEKMMSHHEDYYRAKSVAAEKDPLHVLASPWATTLERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILRGLHTGDLGDLSPTQFRRVSELQCDTVKEENAITEELSEWQDSVSELMGPRADINEKIGRLVSIIKKADDLRLRTLRSVVGLLSPQQAIEFLIASAELFVGIRGWGLNHDRPRHR* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01397 223 Pfam Seed dormancy control 20 94 IPR025422 GO:0006351|GO:0043565
Rops7g01397 223 ProSiteProfiles DOG1 domain profile. 6 220 IPR025422 GO:0006351|GO:0043565
Rops7g01397 223 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01397 Rops-Chr7 19442268 19443552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01397 13 202 bZIP Transcription Factor Family AT5G06960 26.977 1.28e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01397 - - gsj:114374825 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01397 7 19442268 19443552 Rops7g01397 7 19442268 19443552 ECH