Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01395 ATGTCCTCCTTTCACACTGTCCCTCACTCACGTGTCTCACGCATGCACTACTACGACACCACCACCGACGACGACGACGACGAAGATGACAACGATGTTAACAACGAGGAGGAGGAGGAGGAGGAGGAAGAACTACCACCCAACAAGGCTGTTGTTTCTGTCGTCGTCGGCGGCGGAGGTGATGGTTCCTCCCGGCGGGGGATGGTGCTTGACCCGAGAGCTAAATGGGTTCAAGAATGGAACAGGGTGTTCCTTTTGGTATGTGCCACGTGGCTGTTCGTGGACCCACTGTTCTTCTACGCGCTCTCTATAAGTGACACGTGTATGTGTCTCTTCATCGATGGGTGGTTGGTCATCACCGTGACGATGATCCGGTGCATGACGGACATGTTGCACCTTTGGAACATGTGGTTGCAGTTCAACATGGCTAAACGTTCCTCCTTTGGTGTCATTCATCATCACACTCTCAAAACCAAGAAGGGTTTCTTCTTTGATCTCTTTGTTATCCTTCCTCTACCCCAGATTGTGTTATGGGTGGCAATCCCATATCTGTTGGAAAAAGGATCAATTACGTTGGTGATGACAGTGTTCTTAATCATGTTCCTTTTTCAATACCTTCCCAAAATTTATCACTCAGTTTGCATCTTGCGTCGCATGCAAAACCTCTCTGGCTACATTTTCGGAACCGTTTGGTGGGGTATCGCTCTCAACATGATCGCTTATTTCGTCGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGATCCAAAGGGCAGCCAAGTGCTTGGAAGAGCAATGTGGGAAAACAGCAGGCTGTGGCCTAAGAACCCTGTGTTGCAAAGAACCTATATACTATGGTACCACTAGCATGGTGAAAGAGAAAGCAAGGTTGGCATGGGCAGGGAACAGGGAAGCAAGGTCTACATGCTTAGGTAGTGCTGAAAACTATGACTATGGAGCTTATAAATGGACTGTTCAACTTGTAACAAATGATAGCAGATTGGAAAAGATACTCTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGTAACTTGGAGAGCACAACAGAACGGCTAGAAGTGATTTTCAACATTATTGTTTTGACTAGCGGACTCCTTCTAGTCACAATGTTGATTGGAAACATCAAGGTGTTTTTACATGCTACAACATCAAAGAAGCAAGCAATGCAATTAAAGATGAGGAATATAGAATGGTGGATGAGCAAAAGGAGGTTGCCACAAGGGCTAAGGCATCGTGTTCGTAACTATGAGAGGCAACGTTGGGCTGCCATGCGTGGGGTTGATGAATGCCAAATGATCAAAAACTTACCTGAAGGGTTGAGAAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCCCTAGTATTCACAAAGGGAGAAACAATAACAAGAGAGGGAGATCCAGTTAAAAGAATGATATTTGTGGTAAGGGGTCATCTTCGAAGCAGCCAAGTCCTAAGAGATGGGGTGAAAAGCTACTGCATGTTAGGCCCTGGGAACTTCAGTGGAGATGAGCTACTTTCGTGGTGTCTGAGAAGGCCATTTATAGAGCGGCTTCCACCATCAACATCCACTTTGGTCACACTTGAAACCACTGAGGCATTTGGGCTTGAATCTGAGGATGTGAAGTATGTGACACAACATTTTAGGTACACATTTGTGAAGGAAAAGGTTAAGAGAAGTGCAAGGTATTACTCACCTGGATGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGGAGGTATAAGCACCGTTTGACTTTGACATCTTTGTCCTTTATAAGGCCTCGAAGGCCTGTGTCAAGGTCCACTTCCTTGGAAGAGGACAGGCTTCGTCTCTATACAGCTTTGCTAACCTCACCAAAGCCTAATCAGGATGATTTTGACTTTTCATAA 2004 0.4616 MSSFHTVPHSRVSRMHYYDTTTDDDDDEDDNDVNNEEEEEEEEELPPNKAVVSVVVGGGGDGSSRRGMVLDPRAKWVQEWNRVFLLVCATWLFVDPLFFYALSISDTCMCLFIDGWLVITVTMIRCMTDMLHLWNMWLQFNMAKRSSFGVIHHHTLKTKKGFFFDLFVILPLPQIVLWVAIPYLLEKGSITLVMTVFLIMFLFQYLPKIYHSVCILRRMQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLEEQCGKTAGCGLRTLCCKEPIYYGTTSMVKEKARLAWAGNREARSTCLGSAENYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGLRHRVRNYERQRWAAMRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMIFVVRGHLRSSQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSTSTLVTLETTEAFGLESEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPVSRSTSLEEDRLRLYTALLTSPKPNQDDFDFS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01395 667 SUPERFAMILY cAMP-binding domain-like 395 583 IPR018490 -
Rops7g01395 667 Gene3D Jelly Rolls 467 585 IPR014710 -
Rops7g01395 667 FunFam Cyclic nucleotide-gated ion channel 1 396 460 - -
Rops7g01395 667 SUPERFAMILY Voltage-gated potassium channels 72 390 - -
Rops7g01395 667 MobiDBLite consensus disorder prediction 22 45 - -
Rops7g01395 667 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 49 631 - -
Rops7g01395 667 CDD CAP_ED 469 575 IPR000595 -
Rops7g01395 667 MobiDBLite consensus disorder prediction 1 48 - -
Rops7g01395 667 Gene3D Helix hairpin bin 394 460 - -
Rops7g01395 667 ProSiteProfiles cAMP/cGMP binding motif profile. 469 579 IPR000595 -
Rops7g01395 667 Pfam Cyclic nucleotide-binding domain 489 577 IPR000595 -
Rops7g01395 667 SMART cnmp_10 469 598 IPR000595 -
Rops7g01395 667 FunFam cyclic nucleotide-gated ion channel 4 467 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01395 Rops-Chr7 19412531 19421104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01395 52 665 Ion Channels AT5G54250 76.923 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01395 K05391 - gmx:100800795 1102.43