Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01392 ATGGCCTCCTTTCACACTGTCCCTCACTCACGTGTCTCACGCATGCACTACTACGACACCACCACCGATGACGACGACGACGAAGATGACAACGATGTTAACAGCGACGAGGAGGAAGAACCACAACCCAACAAGGCTGTTGTTTCTGTTGGCGAAGGTGGTGGTTCTTCCCGGCCGGGGGTGGTGCTTCTTGACCCGAGAGCGAAATGGGTTGAGGAATGGAACAGGGTGTTCCTTCTTGTGTGTGCCACGTGGATGTTCGTGGACCCACTGTTCTTCTACGCGCTCTCTATAAGTGACACGTGTATGTGTCTTTTTATTGATGGGTGGTTGGTTATCACCGTCACGGTGATCCGGTGCATAACGGACATGTTGCACCTTTGGAACATGTGGTTGCAGTTCAACATGACTAAACGTTCCTCCTTTGGTATCATTCATCATCACACTCTCAAAACCAAAAGGGGTTTCTTCTTTGATCTCTTTGTTATCCTTCCTCTACCCCAGACTGTGATGGTTACCAGCATTACACTTCATCATGTGGATGTCTTCTTGCATGTGCCTTTGCATGTTTTGGATTTGACAAAGGTGTTGTTTTTTTAG 600 0.4817 MASFHTVPHSRVSRMHYYDTTTDDDDDEDDNDVNSDEEEEPQPNKAVVSVGEGGGSSRPGVVLLDPRAKWVEEWNRVFLLVCATWMFVDPLFFYALSISDTCMCLFIDGWLVITVTVIRCITDMLHLWNMWLQFNMTKRSSFGIIHHHTLKTKRGFFFDLFVILPLPQTVMVTSITLHHVDVFLHVPLHVLDLTKVLFF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01392 199 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 174 - -
Rops7g01392 199 MobiDBLite consensus disorder prediction 22 37 - -
Rops7g01392 199 MobiDBLite consensus disorder prediction 15 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01392 Rops-Chr7 19304038 19304894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01392 43 171 Ion Channels AT5G54250 50.993 2.27e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01392 K05391 - gmx:100800795 200.29