Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01391 ATGACTAAACGTTCCTCCTTTGGTATCATTCATCATCACACTCTCAAAACCAAAAGGGGTTTATTCTTTGATCTCTTTGTTATCCTTCCTCTACCCCAGATTGTGTTATGGGTGGCAATCCCATATCTGTTGGAAAAAGGATCAATTACGTTGGTGATGACAATGTTCTTAATGATGTTCCTTTTTCAATACCTTCCCAAAATTTATCACTCAGTTTGCATCTTGCGTCGCATGCAAAACACCTCTGGCTATATTTTCGGAACCGTTTGGTGGGGTATCGCTCTCAACATGATCGCTTATTTCGTCGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGATCCAAAGGGCAGCCAAGTGCTTGGAAGAGCAATGTGGGAAAACAGCAGGCTGTGGCCTAAGAACGCTGTGTTGCAAAGAACCTATATACTATGGTACCACTAGCATGGTGAAAGAGAAAGCAAGGTTGGCATGGGCAGGGAACAGGGAAGCAAGGTCTACATGCTTAGGTAGTGCTGAAAACTATGACTATGGAGCTTATAAATGGACTGTTCAACTTGTAACAAATGATAGCAGGTTGGAAAAGATACTCTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGTAACTTGGAGAGCACAACAGAACGGCTAGAAGTGATTTTCAACATTATTGTTTTGACTAGCGGACTCCTTCTAGTCACAATGTTGATTGGAAACATCAAGGTGTTTTTACATGCTACAACATCAAAGAAGCAAGCAATGCAATTAAAGATGAGGAATATAGAATGGTGGATGAGCAAAAGGAGGTTGCCACAAGGGCTAAGGCATCGTGTTCGTAACTATGAGAGGCAACGTTGGGCTGCCATGCGTGGTGTTGATGAATGCCAAATGATCAAAAACTTACCTGAAGGGTTGAGAAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACAGTATTACTCACCTGGATGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGGAGGTATAA 1128 0.4353 MTKRSSFGIIHHHTLKTKRGLFFDLFVILPLPQIVLWVAIPYLLEKGSITLVMTMFLMMFLFQYLPKIYHSVCILRRMQNTSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLEEQCGKTAGCGLRTLCCKEPIYYGTTSMVKEKARLAWAGNREARSTCLGSAENYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGLRHRVRNYERQRWAAMRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETVLLTWMENLGCCGHSIGLEEV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01391 375 Gene3D Jelly Rolls 316 358 IPR014710 -
Rops7g01391 375 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 356 - -
Rops7g01391 375 Pfam Ion transport protein 22 246 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops7g01391 375 SUPERFAMILY Voltage-gated potassium channels 18 249 - -
Rops7g01391 375 SUPERFAMILY cAMP-binding domain-like 254 356 IPR018490 -
Rops7g01391 375 Gene3D Helix hairpin bin 253 315 - -
Rops7g01391 375 FunFam Cyclic nucleotide-gated ion channel 1 255 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01391 Rops-Chr7 19279551 19289831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01391 18 355 Ion Channels AT5G54250 81.065 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01391 K05391 - zju:107430493 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01391 7 19279551 19289831 Rops7g01391 7 19279551 19289831 ECH