Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01390 ATGGCCTCCTTTCACACTGTCCCTCACTCACGTGTCTCACGCATGCACTACTACGATACCACCACCGATGACGACGACGACGAAGATGACAACGACGTTAACAGCGACGAGGAGGAAGAACCACAACCCAACAAGGCTGTTGTTTCTGTTGGCGAAGGTGGTGGTTCTTCCCGGCCGGGGGTGGTGCTTCTTGACCCGAGAGCGAAATGGGTTGAGGAATGGAACAGGGTGTTCCTTCTTGTGTGTGCCACGTGGATGTTCGTGGACCCACTGTTCTTCTACGCGCTCTCTATAAGTGACACGTGTATGTGTCTTTTTATTGATGGGTGGTTGGTTATCACCGTCACGGTGATCCGGTGCATAACGGACATGTTGCACCTTTGGAACATGTGGTTGCAGTTCAACATGACTAAACGTTCCTCCTTTGGTATCATTCATCATCACACTCTCAAAACCAAAAGGGGTTTATTCTTTGATCTCTTTGTTATCCTTCCTCTACCCCAGATTGTGTTATGGGTGGCAATCCCATATCTGTTGGAAAAAGGATCAATTACGTTGGTGATGACAATGTTCTTAATGATGTTCCTTTTTCAATACCTTCCCAAAATTTATCACTCAGTTTGCATCTTGCGTCGCATGCAAAACACCTCTGGCTATATTTTCGGAACCGTTTGGTGGGGTATCGCTCTCAACATGATCGCTTATTTCGTCGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGATCCAAAGGGCAGCCAAGTGCTTGGAAGAGCAATGTGGGAAAACAGCAGGCTGTGGCCTAAGAACGCTGTGTTGCAAAGAACCTATATACTATGGTACCACTAGCATGGTGAAAGAGAAAGCAAGGTTGGCATGGGCAGGGAACAGGGAAGCAAGGTCTACATGCTTAGGTAGTGCTGAAAACTATGACTATGGAGCTTATAAATGGACTGTTCAACTTGTAACAAATGATAGCAGGTTGGAAAAGATACTCTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGTAACTTGGAGAGCACAACAGAACGGCTAGAAGTGATTTTCAACATTATTGTTTTGACTAGCGGACTCCTTCTAGTCACAATGTTGATTGGAAACATCAAGGTGTTTTTACATGCTACAACATCAAAGAAGCAAGCAATGCAATTAAAGATGAGGAATATAGAATGGTGGATGAGCAAAAGGAGGTTGCCACAAGGGCTAAGGCATCGTGTTCGTAACTATGAGAGGCAACGTTGGGCTGCCATGCGTGGTGTTGATGAATGCCAAATGATCAAAAACTTACCTGAAGGGTTGAGAAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACAGTAAGCTTTAAATTTCTCCAAATTGCAACATTTCTAATAGCATATAACATAGTTAATCAGGGGTATTACTCACCTGGATGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGGAGGTATAAGCACCGTTTGACTTTGACATCTTTGTCCTTTATAAGGCCTCGAAGGCCTGTGTCAAGGTCCACTTCCTTGGAAGAGGACAGGCTTCGTCTCTATACAGCTTTGCTAACCTCACCAAAGCCTAATCAGGATGATTTGGAATTTTCCTAA 1743 0.4521 MASFHTVPHSRVSRMHYYDTTTDDDDDEDDNDVNSDEEEEPQPNKAVVSVGEGGGSSRPGVVLLDPRAKWVEEWNRVFLLVCATWMFVDPLFFYALSISDTCMCLFIDGWLVITVTVIRCITDMLHLWNMWLQFNMTKRSSFGIIHHHTLKTKRGLFFDLFVILPLPQIVLWVAIPYLLEKGSITLVMTMFLMMFLFQYLPKIYHSVCILRRMQNTSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLEEQCGKTAGCGLRTLCCKEPIYYGTTSMVKEKARLAWAGNREARSTCLGSAENYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGLRHRVRNYERQRWAAMRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETVSFKFLQIATFLIAYNIVNQGYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPVSRSTSLEEDRLRLYTALLTSPKPNQDDLEFS* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01390 580 MobiDBLite consensus disorder prediction 15 56 - -
Rops7g01390 580 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 46 490 - -
Rops7g01390 580 MobiDBLite consensus disorder prediction 22 37 - -
Rops7g01390 580 SUPERFAMILY cAMP-binding domain-like 389 490 IPR018490 -
Rops7g01390 580 Gene3D Jelly Rolls 451 497 IPR014710 -
Rops7g01390 580 Gene3D Helix hairpin bin 388 450 - -
Rops7g01390 580 FunFam Cyclic nucleotide-gated ion channel 1 390 454 - -
Rops7g01390 580 SUPERFAMILY Voltage-gated potassium channels 70 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01390 Rops-Chr7 19254626 19265270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01390 504 578 Ion Channels AT5G54250 74.074 5.22e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01390 K05391 - gmx:100800795 779.63