Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01388 ATGGCATCAACATTGATGGCAGCTACAGCAAGCTCTGGCACTGTTCTTAAACCAACTCCTTTCCTTGGCCAAACCAAGGGTACCAATGCCAACCCCCTTAGAGATGTTGTCTCCATGGGAACTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACTTAACTGGAGAATTCCCAGGTGATTATGGATGGGACACTGCTGGGTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTAGGATGCATCACCCCAGAAGTGCTTGAGAAATGGGTGAGAGTGGACTTCAAAGAACCAGTATGGTTCAAAGCTGGAGCTCAAATATTCTCAGAAGGTGGCCTCGACTATTTGGGAAACCCCAACCTTGTTCATGCACAAAGCATCCTAGCAGTGCTTGGTTTCCAAGTTGTTCTCATGGGTCTTGTTGAAGGATTCCGCATCAATGGTCTTCCTGGTGTTGGAGAGGGTAACAACCTCTACCCTGGTGGTCAATACTTTGACCCTCTTGGTCTTGCTGATGACCCTGCCACTTTTGCTGAGCTAAAGGTTAAGGAAATCAAGAATGGAAGGTTGGCTATGTTCTCTATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAAGGCCCCTTGGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGTGCCTGGTTCTTAA 810 0.4753 MASTLMAATASSGTVLKPTPFLGQTKGTNANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01388 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Rops7g01388 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 20 268 IPR001344 GO:0009765|GO:0016020
Rops7g01388 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Rops7g01388 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Rops7g01388 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01388 Rops-Chr7 19202688 19204263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01388 1 268 Chloroplast and Mitochondria Gene Families AT3G27690 66.906 3.18e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01388 K08914 - cave:132175650 535.798