Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01386 ATGATGTTATCATCTTCACCATCTACCCTTATGAGGAGTTCTTTGGAAGAAATGCTTGATTCCATTCGCCGGAGAGATGAGGAGGAGAAGCCGAAGGACTTGCCGCCGGCATTGCCGGCACGGCCAACGTCGAAAGGTAGGCTACCGCCGGCGAGAAGGTCGTTGCCTAATAGGTTCAAGGTTGATGGAGGGAATGATAAGGAAGAGAAAATGGGGCACAGGAGAAAAGGTAGTTTTGGGAACAAGAAGATCAAGGCTGACGTGGAATCACCTTATGTGGAGAAAACAGATGAGAAATTGAGTGAAAAATTACCCCCAGTTCCTGTTTCAATGCCTGCTGCTGATTCCGATGCTTCTGTAGCTCCACCACCATCAGAATTAGAGGACGACAACGTTGTTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCGAAAGGGAAGTGGGAACTAGGAACGATACAGTCTACTTCAGGAGAGGAAGCATCTGTTTCACTGTCAGATGGAAATGTTATGAAAGTGGCCAGAACAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGCGTGGATGATCTTATACAGCTCAGTTATCTAAATGAGCCCTCAGTCCTTCACAATCTTCAGTTTAGATACTATCAAGATATGATTTACAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCCTTCAAAGATGTACCAATATATGGAAATGATCATGTCTCGGCTTACAGGCACAAACTTACTGACAGTCCTCATGTTTATGCTATAGCAGATGCAGCTTATAATGAGATGATTAGAGATGAAGTAAATCAGTCCATTATTATAAGTGGCGAGAGTGGATCCGGGAAAACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTTTGGGATAGAAGATGAAGTTCTTCAGACAAATTTTATATTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACATTGGGGAAAATTTGTGGGGCTAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCTGTGGGGAGAGGTCATATCACATATTTTACCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAGGCTGAATCTTAGAGTGGCCAGCGAATATAAATATCTCAATCAGAGTGACTGCATGACAGTTGATGGTGTTGATGATGCTAAGAAGTTTCATAGGCTTTTGAAAGCATTGGATGTTGTTCAAATGTGCAAAAAGGATCAAGAGCTAGTCTTTAAGATGCTCGCTGCAATATTATGGCTGGGAAATATATCATTCCTAGTTAATGATAATGAAAATCACATTGAGGTGGTGAACGATGAAGCTGTAACCACTGCTGCTTCACTGATGGGTTGCAGCTCCCAGGAGTTGATGACATCACTATCTACCCACAAAATCCTAGCTGGCAAGGATACTATTACCAAAACTTTGACGTTGCGGCAGGCAATTGATGCTAGGGATGCATTAGCAAAATTTATCTATGCAAGCCTGTTCGACTGGCTTATAGAACAAGTTAACAAGTCACTTGAAGTAGGTAAACGGCGTACTGGGAGATCCATAAGCATCCTTGATATTTATGGATTTGAGTCATTCCAGAAAAACAGCTTTGAACAGCTTTGTATAAACTATGCCAATGAGAGGCTTCAGCAGCATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGTGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGGGTGTCTGGATCTCCTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGACGAGGAATCGAAGTTCCCCAGGGCCACTGATATAACACTTGCCAACAAACTTAGGCAGCACTTGCACACCAATCGTTACTTTAAAGGGGAAAGAGGCAGGGCTTTCAGTGTTTGTCATTACGCAGGGGAGGTTTCATATGACACGACCGGCTTTCTAGAGAAGAACAGAGATCCACTGCCTTCAGATTCCATTCAACTACTGTCATCATGTAGCTGTGAACTGCTGCAGTTGTTCTCCAAGATGCTTAATCAATCTCAGAAGCAATCAAACTCCCTGCACATAGGTGCTTCCGACTCACAAAAGCAAAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATACGATGTATCAAGCCAAATGCTAAGCAACTTCCTGGTATATATGACGAAGATCTTGTCCTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCCACTCGAATGACACATCAGGAGTTTGCCAGAAGGTATGGATTTCTGCTTTCTGAGGCCAACGCTACTCAGGATCCATTGAGCATCTCAGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTATATCTTCGAATGGGGCAGGTTGGTGCACTTGAGGATAGGAGAAAACAGGTTTTGCAGGGAATACTTGGGGTTCAAAAATGCTTTCGTGGTCATCAAGCTCGCTGTTATTACCATAAACTTAAGAATGGAGTGACAACGTTGCAATCATTTGTTCGTGGAGAAATTGCGAGAAGGAAATATGGTGTTATGGTGAAATCTTCTGTAACTATTTCTTCTGAAAATATTGATGAGATACAGGCAGTCATCGTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGCATACAAATGGCTTGAATAAGGTTAAGATATATCCTGAAAATGCAAGAGCTAGGCGTAGATCACGTGTGAAAATGCCAGAAGTCAAGGATGTGTCCAAAGAGCAGGTCCAGAATCTGCCTTCGGCTTTGGCAGAACTCCAAAAGCGGGTTGTCAAGGCTGAAGCAACAATAGAGCAAAAGGAAGAAGAAAATGCTGAGTTGAGGGAACAGCTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGAAAAAGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCCGAGAATGCCACTGGTCAACCTCATGCAAGACATGATGTTTCATCACCTTTCCGCTATGATTCTGAAGATGCTACTTCCATGGGATCTCGAACGCCTCGAACGCCTGGTGCTAGCACACCTTTGAAGTATTCTAGTAGTATTTCCGAAGCTGGAGTAAGGAGAGATGCTAATGGCAATTTGAGTACAGTCAACAATCTGATGAAGGAATTTGACGAACGCAGACATACCTTTGATAATGGTGCCAGAGCTCTGCTCGATGTTAGAACCACACGATCTTCTAATGTGAATTCCATTGAAGAACTTAGGAAACTCAAACATGGGTTTGAGGGGTGGAAGAAAGAATACAAGGTTAGATTAAGGGAAACAAAAGCAAGACTTTATAAACTGGGAAATTCAGAAATGGATAAAAGTCGGCGAAAATGGTGGGGGAAATTAAGTTCTAAGGCACTATAG 3609 0.4234 MMLSSSPSTLMRSSLEEMLDSIRRRDEEEKPKDLPPALPARPTSKGRLPPARRSLPNRFKVDGGNDKEEKMGHRRKGSFGNKKIKADVESPYVEKTDEKLSEKLPPVPVSMPAADSDASVAPPPSELEDDNVVYFIKKKLHVWCRQPKGKWELGTIQSTSGEEASVSLSDGNVMKVARTELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYYQDMIYSKAGPVLIALNPFKDVPIYGNDHVSAYRHKLTDSPHVYAIADAAYNEMIRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSFGIEDEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKSRVVQLACGERSYHIFYQLCAGSSSDLKERLNLRVASEYKYLNQSDCMTVDGVDDAKKFHRLLKALDVVQMCKKDQELVFKMLAAILWLGNISFLVNDNENHIEVVNDEAVTTAASLMGCSSQELMTSLSTHKILAGKDTITKTLTLRQAIDARDALAKFIYASLFDWLIEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQGCLDLLEKKPLGLLSLLDEESKFPRATDITLANKLRQHLHTNRYFKGERGRAFSVCHYAGEVSYDTTGFLEKNRDPLPSDSIQLLSSCSCELLQLFSKMLNQSQKQSNSLHIGASDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLSEANATQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRMGQVGALEDRRKQVLQGILGVQKCFRGHQARCYYHKLKNGVTTLQSFVRGEIARRKYGVMVKSSVTISSENIDEIQAVIVLQSVIRGWLVRRHTNGLNKVKIYPENARARRRSRVKMPEVKDVSKEQVQNLPSALAELQKRVVKAEATIEQKEEENAELREQLKQFERRWIEYEKKMKSMEEMWQKQMASLQMSLAAARSSLASENATGQPHARHDVSSPFRYDSEDATSMGSRTPRTPGASTPLKYSSSISEAGVRRDANGNLSTVNNLMKEFDERRHTFDNGARALLDVRTTRSSNVNSIEELRKLKHGFEGWKKEYKVRLRETKARLYKLGNSEMDKSRRKWWGKLSSKAL* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01386 1202 Pfam IQ calmodulin-binding motif 867 883 IPR000048 GO:0005515
Rops7g01386 1202 Pfam IQ calmodulin-binding motif 889 905 IPR000048 GO:0005515
Rops7g01386 1202 Pfam IQ calmodulin-binding motif 924 941 IPR000048 GO:0005515
Rops7g01386 1202 MobiDBLite consensus disorder prediction 1 15 - -
Rops7g01386 1202 Gene3D - 561 750 - -
Rops7g01386 1202 Coils Coil 983 1031 - -
Rops7g01386 1202 CDD MYSc_Myo8 204 848 IPR036022 -
Rops7g01386 1202 PANTHER MYOSIN 183 1194 - -
Rops7g01386 1202 ProSiteProfiles IQ motif profile. 864 891 IPR000048 GO:0005515
Rops7g01386 1202 Gene3D Kinesin motor domain 189 793 IPR036961 -
Rops7g01386 1202 PRINTS Myosin heavy chain signature 549 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 PRINTS Myosin heavy chain signature 317 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 PRINTS Myosin heavy chain signature 602 630 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 PRINTS Myosin heavy chain signature 220 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 PRINTS Myosin heavy chain signature 274 299 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 MobiDBLite consensus disorder prediction 17 35 - -
Rops7g01386 1202 Gene3D Myosin VI head, motor domain, U50 subdomain 430 538 - -
Rops7g01386 1202 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 137 186 IPR004009 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Rops7g01386 1202 MobiDBLite consensus disorder prediction 59 102 - -
Rops7g01386 1202 MobiDBLite consensus disorder prediction 1050 1098 - -
Rops7g01386 1202 SMART iq_5 861 883 IPR000048 GO:0005515
Rops7g01386 1202 SMART iq_5 884 906 IPR000048 GO:0005515
Rops7g01386 1202 SMART iq_5 921 943 IPR000048 GO:0005515
Rops7g01386 1202 FunFam Myosin heavy chain 373 429 - -
Rops7g01386 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 911 IPR027417 -
Rops7g01386 1202 Gene3D - 373 429 - -
Rops7g01386 1202 Gene3D - 794 861 - -
Rops7g01386 1202 SMART MYSc_2a 184 861 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 FunFam Unconventional myosin-XIX 561 750 - -
Rops7g01386 1202 Gene3D - 866 914 - -
Rops7g01386 1202 Pfam Myosin head (motor domain) 192 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 MobiDBLite consensus disorder prediction 1071 1098 - -
Rops7g01386 1202 ProSiteProfiles Myosin motor domain profile. 190 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops7g01386 1202 MobiDBLite consensus disorder prediction 1 124 - -
Rops7g01386 1202 ProSiteProfiles IQ motif profile. 922 949 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01386 Rops-Chr7 19186274 19200474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01386 1 1196 Myosins gene family AT5G54280 62.621 0.0 1556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01386 K10357 - gmx:100819335 1951.79