Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01369 ATGGAGAGCACCGACTCATCCACAAGCTCTCAACAACCGAACCTGCCACCTGGGTTCAGGTTCCACCCGACAGATGAGGAACTCGTGGTTCACTACCTCAAGAAAAAGGCTGCTTCAGCTCCTTTACCAGTAGCCATAATCGCTGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTATTTCTTTAGTCCTAGGGACAGGAAGTATCCTAATGGTGCTAGGCCAAACAGGGCTGCCACTTCTGGGTATTGGAAGGCCACAGGGACTGATAAGCCTGTGTTAACCTCTGGTGGAACTCAAAAGGTTGGCGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAACCCCCAAGAGGGATCAAAACGAATTGGATCATGCATGAGTACAGGATTGCTGATAACAAGCCTAACAATAGGCCTCCTGGGTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGACGATTGGGTGCTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCACCTGTGGAACATGACAGGGAAGATTCAATGGATGATATGATGGGAGGGGTACCTCCTTCCATCAACGTGGGCCAGATGAATTCGAGGTTTCATCTTTCAAAGATGTCAACAAGCTTCAACGGTGCATTGTTGGAAAATGACCAGAACTTATTGGAAGGGATGATGATTAGTAACAACGGTGGGATCAGCACAACTAATGCTGCCATGTCATCTCAATTGGGAGCCTCAAATTCCAAGCCAGAACTTCCTTTTGTTTCACCTATGACTGCATCTTCAAACGCTTCTGCCTCCAAAAGAACTCTCTCTTCACTCTATTGGAATGATGAGGATGTGGCGGGAACCTCTTCATCCAACAAAATGTTCAATTTGGAAAGTGGTGATCATGGAAGTATTGTGAGGACTGAAGAGAATGGCACTGCTACTTCTATTGCCACTCTGCTTAACCAGCTCCCTCAAACCCCTTCATTGCACCAACAAACAATGCTTGGATCAATAGGTGATGGGATAATTCGGACAGCATATCAAATGCCAGGAATGAATTGGTATGCTTAG 1098 0.4636 MESTDSSTSSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRIADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPVEHDREDSMDDMMGGVPPSINVGQMNSRFHLSKMSTSFNGALLENDQNLLEGMMISNNGGISTTNAAMSSQLGASNSKPELPFVSPMTASSNASASKRTLSSLYWNDEDVAGTSSSNKMFNLESGDHGSIVRTEENGTATSIATLLNQLPQTPSLHQQTMLGSIGDGIIRTAYQMPGMNWYA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01369 365 SUPERFAMILY NAC domain 6 176 IPR036093 GO:0003677|GO:0006355
Rops7g01369 365 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Rops7g01369 365 FunFam NAC transcription factor 56 24 181 - -
Rops7g01369 365 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g01369 365 MobiDBLite consensus disorder prediction 1 17 - -
Rops7g01369 365 PANTHER NAC TRANSCRIPTION FACTOR 56 15 194 - -
Rops7g01369 365 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Rops7g01369 365 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01369 Rops-Chr7 18871709 18873710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01369 1 365 NAC Transcription Factor Family AT3G15510 53.385 8.04e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops7g01369 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01369 - - vra:106763825 630.557