Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01365 ATGGATCAAGACATGGAAGACCTAGAGAATCAAACTATTTGCAAAGAGGGAGTGCATGAGGAAGCACCTGACATGTTGCATAAGAAAAAATGTCCTGTAATTCTCAAGTTTGATGATGTTGTCTATAAAATTAAGACCAAGAAAGGTGGAATATTTAAGAAGAATACAAAGGCAGAAGAGAAAGTAATACTGAAGGGAGTGACAGGTATTGTTCAACCTGGTGAAATGCTAGCCATGTTAGGTCCATCTGGAAGTGGCAAAACAACTCTGCTAACAGCATTGGGAGGAAGGCTTGGAGGTAAACTTTATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATAAAATGAAGAGGAACACTGGTTTTGTTACCCAAGATGATGTGCTTTACCCCCACTTGACTGTGACTGAAACCTTGGTGTTCACTGCACTTCTCAGATTGCCCAATAGTGTCACCAAAGAACAGAAAGTTGTGCATGCAAAAGCTGTGATAGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATAGTTGGAAGCCCATCTCTGAGGGGGGTATCTGGGGGAGAGAGAAAAAGGGTTAGCATTGGACAAGAATTGCTCATAAACCCAAGTTTGTTGTTTTTGGATGAACCAACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACTTTGTGGGAGCTAGCAAGAGGAGGGAGAACTATTGTGATGACAATTCACCAACCTTCAAGTAGGCTATACTACTTGTTTCATAAGGTGTTGCTACTGGCAGAAGGGAACCCCTTGTATTTTGGAAAGGGGTCTGAAGCCGTTGAATATTTTTCTAATATTGGATATTCCCCAGCAATGGCCATGAACCCTTCAGACTTCCTTTTGGATCTTGCAAATGGTATCTACACTGATGACTCGAATCAGGACCATACTATAGATAAACAACAATTGATTTCCGCATTTAAGAGCAACTTTGAAGCACAATTGAAGCCAGTAAATCAAGAAACCAGTGACTCTGATACAAGTCAGGGTAGATTTCAAGACACGGGCTCTGAAAAATGGCCTACCAGCTGGTCACAGCAATTCTTTGTGCTATTAAGAAGAGACGTCAAAGAGAGAAAGTATGAATCATTCTCCGGCCTTCGGATTGGTCAGGTCCTTGTGGTTGCTCTTATTTCAGGACTACTTTGGTACAAGTCTGATATTTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTCATATGTGGCTTTTGGGGTTTTTTCCCTCTTTTTCAAGCAATTTTCACCTTCCCCCAAGAGCTAATGATGCTAGAGAAAGAAAGATCCTCTGGAATGTACAGGCTCTCCTCATACTTCATGTCAAGAATGGTAGCTGACCTTCCCATGGAGCTTGTCCTTCCCACCATTTTTCTTCTCATAACCTATTGGATGGCAGGGTTGAAAGCTAATGTGGTCAACTTCTTATGCACACTGCTTTGTCTCTTACTCAATGTGTTAGTAGCACAAGGCCTAGGCCTAGCCATTGGTGCTGTTGTATTGGACCAAAAATCAGCAACCACACTTGCCTCAGTGATCATGTTATGTTTCTTGCTGGCTGGTGGATTTTATGTTCAGAATGTTCCAAAATTTATAGCATGGGTGAAGTACATCTCCATCAGCTACTACACATACCAACTATTTATTGGGTCTCAATATCACACTGGTGAGACATACCCATGTTCTAATGGCCAGTGTCCAATTGAAGAATTTCCTACTATAAAGCAAATGGGGTTTCATTTTCATGGGGAAGCCCTTGCTGCATTAGCTCTAGTGATAATGCTAATAGGTTACAGACTTATAGCTTATTTTGCTCTTGTGAGAATTGGGGTGACAAAGAAATTGGCATAG 1890 0.4153 MDQDMEDLENQTICKEGVHEEAPDMLHKKKCPVILKFDDVVYKIKTKKGGIFKKNTKAEEKVILKGVTGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNGEAFSNKMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEQKVVHAKAVIDQLGLTKCKDSIVGSPSLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELARGGRTIVMTIHQPSSRLYYLFHKVLLLAEGNPLYFGKGSEAVEYFSNIGYSPAMAMNPSDFLLDLANGIYTDDSNQDHTIDKQQLISAFKSNFEAQLKPVNQETSDSDTSQGRFQDTGSEKWPTSWSQQFFVLLRRDVKERKYESFSGLRIGQVLVVALISGLLWYKSDISHLQDQIGLLFFICGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFMSRMVADLPMELVLPTIFLLITYWMAGLKANVVNFLCTLLCLLLNVLVAQGLGLAIGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYISISYYTYQLFIGSQYHTGETYPCSNGQCPIEEFPTIKQMGFHFHGEALAALALVIMLIGYRLIAYFALVRIGVTKKLA* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01365 629 Pfam ABC-2 type transporter 360 566 IPR013525 GO:0016020|GO:0140359
Rops7g01365 629 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Rops7g01365 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 278 IPR027417 -
Rops7g01365 629 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Rops7g01365 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 286 IPR003439 GO:0005524
Rops7g01365 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 615 - -
Rops7g01365 629 FunFam ABC transporter G family member 22 51 280 - -
Rops7g01365 629 Gene3D - 52 280 IPR027417 -
Rops7g01365 629 SMART AAA_5 73 271 IPR003593 GO:0016887
Rops7g01365 629 MobiDBLite consensus disorder prediction 332 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01365 Rops-Chr7 18770709 18774041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01365 71 247 Calmodulin-binding Proteins AT2G36910 28.649 1.36e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01365 K05681 - gmx:100816135 965.296