Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01349 ATGCAGTTGGAGACCCTTTCAAAAATGGAGTTGAGCAAGGGCCTCAGGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTTCCTACGGCCTGGCTGCTGGAGTTTTTACTCAGAATATGGACACTGCTGACACCTTGATGCATGCATTGCGAGTTGGATCAGTGTGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGGTATAAGATGAGTGGACAAGGGAGAGTAAAAGGAATCTACAACCTTAGCAGCTACCTTCAAGTTAAAGCTGTTGTTACTTCTTTGAAGGATCCAGCATGGCAGTAG 321 0.4579 MQLETLSKMELSKGLRDLEEVIRRANATSYGLAAGVFTQNMDTADTLMHALRVGSVWINCYDVFDAAIPFGGYKMSGQGRVKGIYNLSSYLQVKAVVTSLKDPAWQ* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01349 106 Pfam Aldehyde dehydrogenase family 16 96 IPR015590 GO:0016491
Rops7g01349 106 SUPERFAMILY ALDH-like 15 102 IPR016161 GO:0016491
Rops7g01349 106 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 16 96 - -
Rops7g01349 106 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 68 96 IPR016162 GO:0016491
Rops7g01349 106 Coils Coil 8 28 - -
Rops7g01349 106 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 16 67 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01349 Rops-Chr7 18498038 18499001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01349 15 105 Aldehyde Dehydrogenase Gene Family AT3G48000 69.231 2.42e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01349 K00128 - gmx:100798892 164.851