Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01332 ATGGAGAAGAAATCAGTAGCCGGATTATGCTTCCTCTTCCTTATTCTCTTTGTTGCTCAAGAAGTTGTGGTGCAAACTGAGGCAAAGGTTTGTGAGAACCTGGCTGATACATTCAGGGGTCCATGCTTCTCCTCTGCTACCTGCGACGATCACTGCAAGAACAAAGAGCACTTAATCAGTGGCAGGTGCAGAGACGACTTTCGCTGTTGGTGCAAAAGAAACTGTTAA 228 0.4605 MEKKSVAGLCFLFLILFVAQEVVVQTEAKVCENLADTFRGPCFSSATCDDHCKNKEHLISGRCRDDFRCWCKRNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01332 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Rops7g01332 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 72 - -
Rops7g01332 75 Pfam Gamma-thionin family 29 75 - -
Rops7g01332 75 SMART gth_4 30 75 IPR003614 GO:0006952
Rops7g01332 75 Gene3D - 29 75 IPR036574 -
Rops7g01332 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01332 Rops-Chr7 18161617 18162406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01332 6 75 Plant Defensins Gene Families AT2G02130 33.803 1.45e-09 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01332 - K06233 gmx:100779239 150.984