Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01331 ATGGAGAAGAAATCAGTTGCTGGATTGTGCTTCCTCTTCCTTATTCTCTTTGTTGCTCAAGAAATAGTGGTGCAAACTGAGGCAGCGACTTGTGAGAACCTGGCTGCTACATTCAGGGGTCTATGCATCACCTCTGCTACCTGCGACGATCACTGCAAGAACAAAGAGCACTTACTCAGTGGCAGGTGCAGAGACGATGTTCGCTGTTGGTGCACCAAAAACTGTTAA 228 0.4737 MEKKSVAGLCFLFLILFVAQEIVVQTEAATCENLAATFRGLCITSATCDDHCKNKEHLLSGRCRDDVRCWCTKNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01331 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Rops7g01331 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Rops7g01331 75 SMART gth_4 30 75 IPR003614 GO:0006952
Rops7g01331 75 Pfam Gamma-thionin family 30 75 - -
Rops7g01331 75 Gene3D - 29 75 IPR036574 -
Rops7g01331 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01331 Rops-Chr7 18078940 18079437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01331 1 75 Plant Defensins Gene Families AT2G02100 30.263 4.30e-09 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01331 - - gmx:100779239 144.05