LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops7g01330	ATGGATTACTATCGTGATGTTCTTGCTATTGGAACATTTCATGCTGTTAAGAATGGTATCACCGTAGTATGTGGCTTTGGAAATTCTGGACCACAACCTGGAAGTGTATCAAATTTTGCACCTTGGATACTTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTGAAGCTGTTGTTGAACTCCCCAATGGACAACGCTTTGAGGGATATACTCTTTCTAATGGTGTCCCAGAAGACAAACTTTATCCACTCATTAATGTGCCTGTTGCTTTCAAAGTGGAAGATGTTTGTCGTGGTATTCAAAAAGGGGGATTTTTGAATAAGATCAGAACTAGTCTAAAATACCTTTGTCCATCGAAACATATTCCTTCAAAAATTGAGGTGGATGTAAGCAATCTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCATCCATCCTTGAAGCTTCTAAGCAAGAATGAAAACATGCCCATATGTAAAATAGTTTCAACAAGTTTGGGAAATGAAGCACCTATTGCTGAATGA	534	0.3783	MDYYRDVLAIGTFHAVKNGITVVCGFGNSGPQPGSVSNFAPWILTVGASTLDRKFEAVVELPNGQRFEGYTLSNGVPEDKLYPLINVPVAFKVEDVCRGIQKGGFLNKIRTSLKYLCPSKHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKIVSTSLGNEAPIAE*	178

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops7g01330	177	FunFam	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein	83	167	-	-
	Rops7g01330	177	Gene3D	Peptidase S8/S53 domain	1	78	IPR036852	GO:0004252\|GO:0006508
	Rops7g01330	177	Pfam	Ribosomal protein TL5, C-terminal domain	85	166	IPR020057	-
	Rops7g01330	177	SUPERFAMILY	Subtilisin-like	3	75	IPR036852	GO:0004252\|GO:0006508
	Rops7g01330	177	PANTHER	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	85	167	-	-
	Rops7g01330	177	Gene3D	Ribosomal protein L25, beta domain	84	159	IPR037121	-
	Rops7g01330	177	SUPERFAMILY	Ribosomal protein L25-like	85	165	IPR011035	GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops7g01330	Rops-Chr7	18069561	18071353	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops7g01330	2	90	Subtilisin-like Serine Gene Family	AT5G59810	61.798	5.01e-33	122

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops7g01330	K02897		-	vum:124826581	157.532