Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01320 ATGAGCAACAGCATGACAAACATGAACTCATCAACGTCGCGTGGTTCCACCTCATCCTCCAATGGCCTCCTCACCGTCACCATCGCCAGCAACCACCCTGACGATCACCACGACGACGACGACTTTCTCGCTGATCCCGACGATCCTTTCGACATTACCCACACCAAGAATGCTCCTCCTGAGACCCTCGAGCGTTGGCGAGCAGCTCTGCTTTTCAGATTGGCTGGTGAACGTGAACTAGTGACAAATACAGTAGTGGCGGCATCCCCAAGTCCAGATGGTAACTTCGCAGTTGGGCTCGAGCAACTTGTTTCGCTGTCTAAGAGTCAGAATATTCCTGCTTTACAACAATATGGAGGGGTTAAAGGCTTATCAAATTTACTAAATTCAAATCCGGATAAAGGGATTAGTGGGGATGATGCTGATCTTTTAAAGAGGAAAAATGCGTTCGGAACCAATACATATCCTCGGAAAAAGGGGAAAAGTTTCTGGAGGTTTCTATGGGAAGCTTGGCAAGATCTGACCCTTATAATATTGATTGTAGCAGCTGTGGTTTGGGTTTGGAACAAGGATGGTATGACGGGGGAAGCATTGCTTTCGCAGTTATTCTTGTCATTGTAG 621 0.4718 MSNSMTNMNSSTSRGSTSSSNGLLTVTIASNHPDDHHDDDDFLADPDDPFDITHTKNAPPETLERWRAALLFRLAGERELVTNTVVAASPSPDGNFAVGLEQLVSLSKSQNIPALQQYGGVKGLSNLLNSNPDKGISGDDADLLKRKNAFGTNTYPRKKGKSFWRFLWEAWQDLTLIILIVAAVVWVWNKDGMTGEALLSQLFLSL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01320 206 PANTHER CATION TRANSPORTING ATPASE 75 187 - -
Rops7g01320 206 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Rops7g01320 206 MobiDBLite consensus disorder prediction 1 28 - -
Rops7g01320 206 Pfam Cation transporter/ATPase, N-terminus 119 186 IPR004014 -
Rops7g01320 206 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 190 IPR023298 -
Rops7g01320 206 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01320 Rops-Chr7 17973301 17980714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01320 16 184 Primary Pumps ATPases AT3G21180 45.161 6.10e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01320 K01537 - gmx:100802659 247.669